Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06759 ATGGAGATGGAGGATTTTATGTGTCATAGTTCAAGCTTCCTCTTTCCTCCGTCGGAGAAAAATCAAGAGAAGGATTCCGTAACAAACCACCGCTATGCTCTTGTCATTCTCAACCAATCCCTCCCGAGATTCGCTCCTCTGCTTTGGGACCACGCACAGCTACGACTCTGCGCAGATGGAGGTGCCAACCGTCTCTATGATGAAATGCCTCTTCTCTTGTCTCCTCAACTTGATTCTTCTCTTACTCCACCCAGGTGCAAGCCTGATGTAATCAAAGGTGACATGGATTCAATTCGGACTCCAGTTCTTGACTTCTATAAAAAGCTGGGAACTAAAATAATAGATGAATCTCATGATCATAATACCACTGATTTACACAAATGTATAGCATACATTCGTGACCACACGCCAGATATTGATAAATCAAAAGTGAGTTGA 438 0.4315 MEMEDFMCHSSSFLFPPSEKNQEKDSVTNHRYALVILNQSLPRFAPLLWDHAQLRLCADGGANRLYDEMPLLLSPQLDSSLTPPRCKPDVIKGDMDSIRTPVLDFYKKLGTKIIDESHDHNTTDLHKCIAYIRDHTPDIDKSKVS. 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06759 145 PANTHER THIAMIN PYROPHOSPHOKINASE 7 134 - -
Seca8g06759 145 Pfam Thiamin pyrophosphokinase, catalytic domain 47 138 IPR007371 GO:0004788|GO:0005524|GO:0009229
Seca8g06759 145 NCBIfam thiamine diphosphokinase 34 137 IPR006282 GO:0004788|GO:0006772
Seca8g06759 145 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 29 140 IPR036759 GO:0004788|GO:0005524|GO:0009229
Seca8g06759 145 Gene3D Thiamin pyrophosphokinase, catalytic domain 32 145 IPR036759 GO:0004788|GO:0005524|GO:0009229
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06759 Seca-Chr8 162402207 162404448 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06759 K00949 - gmx:100786303 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06759 8 162402207 162404448 Seca8g06759 8 162402207 162404448 ECH