Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06757 ATGAACAATCATACAAAGATTTTTATTCGTCATCCTGAGGTCAAGTGGGCTCAAAGGTTGGACAAGGTCTATATCACGGTTCAGTTGCCTGATTCCAAAAATGCAAAAGTGGACCTTACTCCAGATGGCATTTTTACTTTTTCTGCCACTGCTGGTTCTGAAGACCACTTGTATGAGCTAAAGTTGGAGCTCTTTGACAAGGTTAATGTAGAGGAGAGTAAAATTAATGTAGGAGTGAGAGGCATATTCACTGTAGTGCAGAAGGCAGAGATAGGATGGTGGAAAAGGTTACTGAAGGGAGAAGGCAAGCCTCCACATTATGTGAAAGTAGATTGGGATAAATGGGTGGATGAAGATGAAGATGAGGGTCTTGGTGACCTGGACTTGGGAGGGATGGACTTCTCGAAATTTGGTGGGATGGATGCAATGGGTGGTGGTGATTTTGATGAGAGTGATGATGAAGGGCAAGAAGTGTCAAAGCCTGAAAAACAAGAGACTGGCAATGAGAAGGAAGGGGGAGAACAAGATGCTGGCAAGAGCACTGGTAAGGAAGCTGCTCCAAGCACATAA 570 0.4421 MNNHTKIFIRHPEVKWAQRLDKVYITVQLPDSKNAKVDLTPDGIFTFSATAGSEDHLYELKLELFDKVNVEESKINVGVRGIFTVVQKAEIGWWKRLLKGEGKPPHYVKVDWDKWVDEDEDEGLGDLDLGGMDFSKFGGMDAMGGGDFDESDDEGQEVSKPEKQETGNEKEGGEQDAGKSTGKEAAPST. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06757 189 MobiDBLite consensus disorder prediction 138 189 - -
Seca8g06757 189 PANTHER TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE 10 165 IPR045250 GO:0051879
Seca8g06757 189 MobiDBLite consensus disorder prediction 156 178 - -
Seca8g06757 189 Pfam CS domain 13 88 IPR007052 -
Seca8g06757 189 CDD p23_hB-ind1_like 12 120 - -
Seca8g06757 189 FunFam Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 9 129 - -
Seca8g06757 189 Gene3D - 9 128 IPR008978 -
Seca8g06757 189 ProSiteProfiles CS domain profile. 9 98 IPR007052 -
Seca8g06757 189 SUPERFAMILY HSP20-like chaperones 10 149 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06757 Seca-Chr8 162381559 162384782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06757 - K15730 gmx:100796372 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06757 8 162381559 162384782 Seca8g06757 8 162381559 162384782 ECH