Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06753 ATGGACACTGGATCACTTCTTCATCCCCAATCCTCACATATTCAAGCTTGTTCTTGTTCATTCCAGACCTTCTGCTACTTCTGCTGTTGGCCTCGCTGGCCCTGGTTGTATGCAGGAGCTGCAGAGGTTTTGCCTATTGTGGATTCAGATTTAACAAAGATTGCTGCCAGAGTTGCTGAAACCGCTAAACAACTTTGCATCAAGAAATCCGTAAATGATGTGATTGTGGAAGTGGTGGAAGGTGATCCCAGAAATGTTCTTTGCGATGCAGTGGAGAAGTACCATGCTTCAATATTGGTTGTGGGTAGTCACGGTTATGGGGCTATAAAAAGGGCGGTTTTAGGTAGTGTCAGTGACTATTGTGCTCATCATGCTCACTGCACTGTGATGATCGTGAAGAAGCCAAAAACCAAACACTGA 420 0.45 MDTGSLLHPQSSHIQACSCSFQTFCYFCCWPRWPWLYAGAAEVLPIVDSDLTKIAARVAETAKQLCIKKSVNDVIVEVVEGDPRNVLCDAVEKYHASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKTKH. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06753 139 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 39 139 - -
Seca8g06753 139 Pfam Universal stress protein family 57 133 IPR006016 -
Seca8g06753 139 CDD USP_Like 55 132 - -
Seca8g06753 139 Gene3D HUPs 31 139 IPR014729 -
Seca8g06753 139 PRINTS Universal stress protein signature 93 105 IPR006015 -
Seca8g06753 139 PRINTS Universal stress protein signature 111 133 IPR006015 -
Seca8g06753 139 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 34 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06753 Seca-Chr8 162278333 162281088 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06753 - - gmx:100816212 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06753 8 162278333 162281088 Seca8g06753 8 162278333 162281088 ECH