Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06742 ATGGATAAGAAGTTTTCCTACCAAGAAGTATTCTGGGAGAACTCAAGGAGAGTGGAACTCTTCACCTGCAAATGGTTGCCTTTTTCTTCTCCGAGAGGCCTTGTTTTCCTTTGCCATGGTTATGGAATGGAATGCAGTAGATTCATGAGAGAATGTGGAGCGAAGTTAGCATGTGCTGGTTATGCGGTGTTTGGGATCGACTTTGAAGGACATGGACGCTCCGCAGGTATTCGTTGTTATATAACTAAGTTTGACAACATTGTCGACGATTGTCACGACTATTTCAAGTCAATTTGCGAGCTCCAAGAGTACAAGAGAAAGCCCAAGTTCTTATATGGAGAGTCAATGGGAGGGACAGTGTGCCTACTATTGCATAAAAGGGACCCTTCATTCTGGGAAGGTGCCGTTCTTGTTGCACCCATGTGCAAGATATCAGACAAGCTGAAGCCACCTCCAGTTGTTGTGAACATATTGTCGAAAATGGCAGATCTTGTACCAAAGTGGAAAATAGTTCCCTCAAAGGATATCATCGATTCAGCCTTCAAAGACCAAGGCAAACGAGAAATGATAAGGAAAAACAAGTTGATATACCAGGACAAGCCCAGGTTGAAAACAGCATTGGAGATGCTGAGAACAAGCATGGACATTGAAAGCAGCTTGCATGAGGTAACAATCCCATTCATAGTGTTACATGGAGAGGAAGATACGGTAACAGACCCAGAAGTAAGTAAGGCATTATATGAGCAAGCAGGTAGCACAGACAAGAGCATGAAATTGTACCCTGGAATGTGGCATGGCATAACATCAGGGGAATCTGATGAAAACATCAAGGTTGTCTTCACAGACATCATAAATTGGCTGGAGAAGCGCACTCCCAAGCAATGTTCTGAGTCTTTTGGATCAACTCAAACTTGTAACCATTCCAACATTTTTCAGTGGCAAGGACGTCGCGCATCAATGTAG 963 0.4351 MDKKFSYQEVFWENSRRVELFTCKWLPFSSPRGLVFLCHGYGMECSRFMRECGAKLACAGYAVFGIDFEGHGRSAGIRCYITKFDNIVDDCHDYFKSICELQEYKRKPKFLYGESMGGTVCLLLHKRDPSFWEGAVLVAPMCKISDKLKPPPVVVNILSKMADLVPKWKIVPSKDIIDSAFKDQGKREMIRKNKLIYQDKPRLKTALEMLRTSMDIESSLHEVTIPFIVLHGEEDTVTDPEVSKALYEQAGSTDKSMKLYPGMWHGITSGESDENIKVVFTDIINWLEKRTPKQCSESFGSTQTCNHSNIFQWQGRRASM. 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06742 320 SUPERFAMILY alpha/beta-Hydrolases 6 291 IPR029058 -
Seca8g06742 320 PRINTS Alpha/beta hydrolase fold signature 60 75 IPR000073 -
Seca8g06742 320 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Seca8g06742 320 PRINTS Alpha/beta hydrolase fold signature 227 241 IPR000073 -
Seca8g06742 320 FunFam Alpha/beta-Hydrolases superfamily protein 2 294 - -
Seca8g06742 320 Gene3D alpha/beta hydrolase 1 295 IPR029058 -
Seca8g06742 320 PANTHER PHOSPHOLIPASE-RELATED 13 290 - -
Seca8g06742 320 Pfam Serine aminopeptidase, S33 30 268 IPR022742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06742 Seca-Chr8 162143987 162149150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06742 48 310 Acyl Lipid Metabolism Gene Families AT2G47630 65.019 1.64e-134 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06742 K18368 - gmx:100805545 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06742 8 162143987 162149150 Seca8g06742 8 162143987 162149150 ECH