Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06732 ATGGGTTTCAATTTTCAAGCAATACCCATCTTCCCAACACCAATTACACGCTCTATCCTCTTTCTTTTGATCTTGTTCATAATCCCCCTAGCCTCTGCCGAAAACACGACCACTTTTACAGCATATGATGTCCTTCAACAGTACGATTTCCCAGTTGGGCTCCTTCCCAAAGGGGTAGTTGGCTACGAATTGGACAGCACGAGCGGCAAATTCAAAGCGTACCTAGATGGTTCTTGCACGTTTAAGATCGAATCTTACGAGTTGAAGTACAAGTCCACCATATCGGGTGTCATTAAGAAGGACAGGATCACTGGATTAAAAGGAATCGAAGTGAAGGTGTTGTTTCTGTGGCTGAACATTGTGACAGTAACTCGCGATGAGGATGAACTCCAATTCTCGGTTGGAATTGCTTCTGCGGACTTTCCAGTGAGTAACTTCTATGAGAGCCCCACTTGTGGTTGTGGCTTTGACTGTGTTGATGGGGTTGGGAACAAGTCGCGTGATCTTGTGCTGTCTTCTTAA 522 0.4521 MGFNFQAIPIFPTPITRSILFLLILFIIPLASAENTTTFTAYDVLQQYDFPVGLLPKGVVGYELDSTSGKFKAYLDGSCTFKIESYELKYKSTISGVIKKDRITGLKGIEVKVLFLWLNIVTVTRDEDELQFSVGIASADFPVSNFYESPTCGCGFDCVDGVGNKSRDLVLSS. 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06732 173 SUPERFAMILY At5g01610-like 16 158 IPR036758 -
Seca8g06732 173 PANTHER T31J12.3 PROTEIN-RELATED 28 152 IPR007493 -
Seca8g06732 173 Gene3D - 29 152 IPR036758 -
Seca8g06732 173 Pfam Protein of unknown function, DUF538 41 146 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06732 Seca-Chr8 162008638 162009159 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06732 - - adu:107475976 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06732 8 162008638 162009159 Seca8g06732 8 162008638 162009159 ECH
Seca8g06734 8 162029640 162030134 Seca8g06732 8 162008638 162009159 ECH
Seca8g06734 8 162029640 162030134 Seca8g06732 8 162008638 162009159 PCT