Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06729 ATGGAAACCATTACAAAACACTTGTCCCTCTTGGCTATCTGCCTTATTTTATTGCAACACCAAACAGGTGCACAAGAAAGCAAAGGCAAGGACCTAATTGAGAAGATATGTGCACAAACGCCTAACAAGGATTTGTGTGTAGAGGTCCTATCTTCTGATCCATCAAGTAAAGAAGCGAGTCTACAAGAGCTAGCAATGATATCACTGAGGGTGGCAGCAGCAAATGCCACGGGGATATTAACTGATGTGAAGATGATGATTGACGATCCTGATTTGGACCCTGGGATTCAACAAGGATTGGCTGATTGTAAAGAGACCTTATTGGATGCAGAGGGTCAGCTTGAGGATACAGTTGCTGCGCTATTGACAAATGCCAAAAGTGATGCTGAATTATGGCTTAAGGCTGCATTGGCTGCAATTGATACATGTGACGCTTCGATCCCTGGTGATGATGATATTCTCTCTAGGAGGAGTGTTGGCTTTCGCCATTTGTGCAACATTGCCATGGCCATTAGCAAGGCCATGACTAATGACGCCTAA 540 0.4426 METITKHLSLLAICLILLQHQTGAQESKGKDLIEKICAQTPNKDLCVEVLSSDPSSKEASLQELAMISLRVAAANATGILTDVKMMIDDPDLDPGIQQGLADCKETLLDAEGQLEDTVAALLTNAKSDAELWLKAALAAIDTCDASIPGDDDILSRRSVGFRHLCNIAMAISKAMTNDA. 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06729 179 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 175 IPR035513 -
Seca8g06729 179 Pfam Plant invertase/pectin methylesterase inhibitor 31 171 IPR006501 GO:0004857
Seca8g06729 179 NCBIfam pectinesterase inhibitor domain 7 175 IPR006501 GO:0004857
Seca8g06729 179 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 171 - -
Seca8g06729 179 SMART PMEI_2 28 171 IPR006501 GO:0004857
Seca8g06729 179 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 174 IPR035513 -
Seca8g06729 179 CDD PMEI-like_1 32 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06729 Seca-Chr8 161992434 161992973 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06729 - - gmx:102667060 226.483