Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06716 ATGTCTCAACCTAAGCTTGGTAGACTTCCAAGTATCAGAGACCGAGTGGAGAATACCCTCTCTGCTCACCGTAACGAACTCGTTTCTCTCCTCTCCAGGTATGTAGATCAGGGGAAAGGGATTTTGCAACCCCATAATTTGGTTGATGAGCTGGAAAATCTCCAAGGCGAGGATCAAGCAACTAAGGATCTCAAAAATGGCCCCTTTGGTGAAATCATCAGGGCCGCACAGGATGCCATAGTTTTGCCTCCTTTTGTGGCCATAGCAGTTCGTCCACGACCTGGTGTTTGGGAATATGTCCGTGTTAACGTCTTTGAACTCAGTGTTGAGCAATTAAGCGTTTCTGAATATCTCCGCTTCAAAGAAGAACTTGTTGAGGGAACGAGTAGTAACAAATTTCTACTAGAGCTTGATTTTGAGCCATTCAATGCCTCGTTTCCTCGCCCATCCCGCTCATCATCTATTGGCAATGGTGTTCAGTTTCTTAATCGCCACCTTTCTTCAATTATGTTTCGTAACAAAGATACATTGGAGCCATTGCTTGATTTCCTCCGAGTTCATAAATATAAAGGCCAAGGACTGATGGTAAATGATCGTATACAAAACATTTCAAAACTTCAATCTGCTTTGGCCAAGGCTGAGGAGTATCTTTGTAGGCTTGCACATGATACACCCTATTCTGAGTTTGAATTTGTGTTTCAAGGAATGGGTTTTGAGAGAGGTTGGGGTGATACAGCTGAACGGGTATTGCAGACAATGCATCTGCTCTTGGACCTTCTTCAGGCTCCTGACCCTTCTACACTAGAAACTTTTCTTGGGAGAGTGCCAATGGTGTTTAATGTTGTTATATTATCTCCTCATGGCTACTTTGGGCAAGCCAATGTCCTGGGTTTGCCTGACACTGGTGGGCAGGTTGTTTATATACTGGATCAAGTTCGTGCCCTTGAGAACGAGATGCTCCTTCGGATGAAGAAACAAGGACTTGATTTCACTCCTAAAATTCTAATTGTTACAAGGTTAATACCTGATGCAATGGATACAACATGCAACCAGAGGCTAGAAAGAGTCAGTGGTACTGAACACACTCATATTTTGCGAGTTCCTTTCAGGTCAGAGAAAGGAATTCTCCGACAATGGATCTCAAGGTTTGATGTATGGCCTTATCTGGAGACTTTTGCACAGGATGTTGCCAGTGAAATTGCTGCTGAGTTACAGGGTTATCCTGATTTCATCATAGGAAACTACAGTGACGGCAATCTTGTTGCATCTTTATTAGCTTGTAAAATGGGAGTTACACAGTGCACAATTGCACATGCATTGGAGAAAACAAAATATCCAGATTCAGGTACATATTGGAAGAAGTTCGAGGATAAATATCATTTTTCATGTCAGTTCACTGCTGATCTGATAGCCATGAATAGTGCTGATTTTATCATTACCAGTACATACCAAGAGATTGCAGGAACGAAGAATACTGTTGGCCAGTATGAGAGCCACACTGCTTTTAGTCTTCCTGGGCTCTATAGGGTTGTCCATGGCATTGATGTTTTTGATCCTAAGTTCAATATTGTCTCCCCTGGAGCAGATATGACCATATATTTCCCCTACTCAGAAAAACAGAATAGACTTACTGCTCTGCATGGTTCAATTGAAAAGCTATTATATGACCCTGAGCAGACTGATGAATACATTGGTACTCTGAAAGATCAGTCAAAGCCCATAATTTTCTCCATGGCAAGGCTAGACCGAGTGAAAAACATAACTGGGTTGGTAGAATTCTATGGAAAGAACACCAAACTGAGAGAACTGGTCAACCTTGTTGTAGTAGCTGGTTATATTGATGTAAATAAGTCCATGGACAGAGAAGAAATTGCAGAAATTAAGAAGATGTATGAACTCATTGAACAGTATGATTTAAAGGGTGATTTTCGTTGGATTGCTGCCCAAACAAATAGAGCACGTAATGGTGAGCTTTATCGCTACATAGCAGACACAAAAGGTGCTTTCGTTCAGCCTGCCTTCTATGAAGCTTTTGGGCTTACAGTTGTAGAGGCCATGACTTGTGGCCTCCCAACATTTGCTACTTGCAATGGTGGTCCAGCTGAGATTATTGAGCATGGAAAATCAGGATTCCATATTGATCCTTATCACCCTGATCAAGCTTCTGAGGTGTTGATTGAATTCTTCCAACGGTGCAAGGAGGACCCAAGCCATTGGAATAAAATATCTGATGGTGGTCTCAAAAGAATTTATGAAAGGTTCACATGGAAGATCTATTCTGAAAGGCTTATGACCTTGGCGGGAGTTTATAGTTTCTGGAAGCACGTCTCCAAATTGGAGAGACGTGAAACTCGACGATATCTTGAGATGTTCTATATCCTTAAATATCGTGATTTGGCCAAGTCTGTTCCGCTAGCAAAGGAAGATGCAAGTGATGGTACAAACTAA 2448 0.4191 MSQPKLGRLPSIRDRVENTLSAHRNELVSLLSRYVDQGKGILQPHNLVDELENLQGEDQATKDLKNGPFGEIIRAAQDAIVLPPFVAIAVRPRPGVWEYVRVNVFELSVEQLSVSEYLRFKEELVEGTSSNKFLLELDFEPFNASFPRPSRSSSIGNGVQFLNRHLSSIMFRNKDTLEPLLDFLRVHKYKGQGLMVNDRIQNISKLQSALAKAEEYLCRLAHDTPYSEFEFVFQGMGFERGWGDTAERVLQTMHLLLDLLQAPDPSTLETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRMKKQGLDFTPKILIVTRLIPDAMDTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFAQDVASEIAAELQGYPDFIIGNYSDGNLVASLLACKMGVTQCTIAHALEKTKYPDSGTYWKKFEDKYHFSCQFTADLIAMNSADFIITSTYQEIAGTKNTVGQYESHTAFSLPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSEKQNRLTALHGSIEKLLYDPEQTDEYIGTLKDQSKPIIFSMARLDRVKNITGLVEFYGKNTKLRELVNLVVVAGYIDVNKSMDREEIAEIKKMYELIEQYDLKGDFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCNGGPAEIIEHGKSGFHIDPYHPDQASEVLIEFFQRCKEDPSHWNKISDGGLKRIYERFTWKIYSERLMTLAGVYSFWKHVSKLERRETRRYLEMFYILKYRDLAKSVPLAKEDASDGTN. 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06716 815 PANTHER - 8 808 IPR012820 GO:0005985|GO:0016157
Seca8g06716 815 Coils Coil 13 33 - -
Seca8g06716 815 Gene3D - 11 147 - -
Seca8g06716 815 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 297 765 - -
Seca8g06716 815 Pfam Sucrose synthase 8 555 IPR000368 GO:0005985|GO:0016157
Seca8g06716 815 Gene3D Glycogen Phosphorylase B; 529 756 - -
Seca8g06716 815 Gene3D Glycogen Phosphorylase B; 282 799 - -
Seca8g06716 815 FunFam Sucrose synthase 148 277 - -
Seca8g06716 815 Pfam Glycosyl transferases group 1 566 741 IPR001296 GO:0016757
Seca8g06716 815 NCBIfam sucrose synthase 24 805 IPR012820 GO:0005985|GO:0016157
Seca8g06716 815 FunFam Sucrose synthase 11 147 - -
Seca8g06716 815 CDD GT4_sucrose_synthase 280 765 - -
Seca8g06716 815 Gene3D - 148 277 - -
Seca8g06716 815 FunFam Sucrose synthase 282 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06716 Seca-Chr8 161870465 161876611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06716 1 809 Glycosyltransferase AT4G02280 81.459 0.0 1415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06716 K00695 - gmx:100802045 1455.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06716 8 161870465 161876611 Seca8g06716 8 161870465 161876611 ECH