Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06684 ATGGCTCATCGAAGAGCCAAGCTCTTGTTCCTTCTATACGCTCTCTGCTTTTCTCTCAGTGCCATCGCCGGAAATAGCTATTACGATATACTTCAAGTATCGAAAGGTGCATCGGATGAACAGATAAAGAGAGCGTACAGGAAGCTCGCGTTGAAGTACCATCCCGATAAGAATCCGGGAAACCAAGAAGCTAATAAGAGATTTGCCGAGATTAGCAACGAGGGTTTGAAACAGCATGCTGCCGGGGGAGGCAGAGGCGGTGGAATGGGAATGAACTTCCAAGATTTTTTCGGCTCCTTTTTCGGTGAGGGTCCAATGGAGGAGGAAGAGAGAATTGTGAAAGGTGATGACGTGGTTGTTGAATTGGATGCAACCCTGGAAGATTTGTACATGGGAGGTTCCTTGAAGGTTTGGAGGGAGAAAAATGTTTTAAAGCCTGCACCTGGGAAGAGACGCTGTAACTGTAGACATGAGGTTTATCACAAGCAAATAGCTCCTGGGATGTTTCAACAAATGACGGAACAGGTCTGTGAGCAATGTCCAAATGTTAAATATGAAAGAGATGGATATTTCATCACTGTTGATATTGAGAAAGGCATGCAAGACGGGCAGGTCAGCTTTCAAAGTTTATATATAAATGCTTCAAGCAATAGGCAATTATGA 663 0.4419 MAHRRAKLLFLLYALCFSLSAIAGNSYYDILQVSKGASDEQIKRAYRKLALKYHPDKNPGNQEANKRFAEISNEGLKQHAAGGGRGGGMGMNFQDFFGSFFGEGPMEEEERIVKGDDVVVELDATLEDLYMGGSLKVWREKNVLKPAPGKRRCNCRHEVYHKQIAPGMFQQMTEQVCEQCPNVKYERDGYFITVDIEKGMQDGQVSFQSLYINASSNRQL. 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06684 220 Pfam DnaJ domain 27 72 IPR001623 -
Seca8g06684 220 CDD DnaJ 27 73 IPR001623 -
Seca8g06684 220 Gene3D - 106 207 - -
Seca8g06684 220 SUPERFAMILY HSP40/DnaJ peptide-binding domain 113 205 IPR008971 GO:0006457|GO:0051082
Seca8g06684 220 Gene3D DnaJ domain 20 75 IPR036869 -
Seca8g06684 220 SUPERFAMILY Chaperone J-domain 25 104 IPR036869 -
Seca8g06684 220 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 11 5 72 - -
Seca8g06684 220 PRINTS DnaJ domain signature 28 46 IPR001623 -
Seca8g06684 220 PRINTS DnaJ domain signature 46 61 IPR001623 -
Seca8g06684 220 ProSiteProfiles dnaJ domain profile. 26 98 IPR001623 -
Seca8g06684 220 SMART dnaj_3 25 81 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06684 Seca-Chr8 161455749 161461147 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06684 K09517 - gmx:100807885 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06684 8 161455749 161461147 Seca8g06684 8 161455749 161461147 ECH