Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06681 ATGGAAACTATGTGTTTGAAAAGTGGGATAGTTCCACCGATCTCTATCGGTGGGTCTCTGGATGTACGCCCCAACCCTTCTCAGGTGAGCGCGGTGGGGCGTTCCGCCGCGGAGAAACCGCCGCAAAAATCCGTGTTTTCGAGATTCTCCTTTAGGTACCCTTTGGAGTCTCTCTGGCCTCGGCCGCGGGGTTCTGGGAATAGCAGGCTCAGTGGGCTGGACCTCGACGACGCCGTTTTGGCGGAGAACGGTGAAGGGAAGGCCGTAAGAGATGACGTGGATGATGAAGCGGTGAATGGCGTCGAGGGGCAGAGCCGAAACTGGGTTTTGAAGATTTTGCACGTGAAGTCTGTGTGGAAGGGGGAACAGGGGAACGGTGATGATGCGGGAGATGAAGGGGAAGGCACTGCGAACGATCAAAACAATGACTACGATGAAGTGTGTGAGGCTTGCACGGTTGATGAAGATGAAGCTGAAGATGATGACGAAGAAGAGGTTCAATTCGATAAAGACTCGTTTTCCAGAATGCTACGGAGGGTGTCCTTAGCTGAAGCCAGATTGTATGCGCAGATGTCACACTTGGGGAGCTTGGCTTACTCTATACCCAAAATCAAGCCAGGGAAACTCTTAAAACATTATGGTCTGCGTTTTGTAACTTCATCACTAGAGAAGAAGGAATTGGCAGCAGCAGCAACAGCTGAGAAGAATCCCCAGGAAATTGAAGCTGACAAGAAGGAAGAAGAAGAAGAAAGAAAGGAGCTGAATAATGGTGGATACAAGATAAGTGCAAGTGCAGCTTATAATATTGCTGCCTCTGCTGCCTCTTATCTGCATGCTCAGACTAGGAGCATACTTCCATTCAAATCTTCAAATGCTGCGGCTGGTGATGAATCACCTGAAAGAAGCAATGAAAGCTTTGACAGTGTTAACATGTTAAACTCAGAGGTGGCATCCTTGATGGCAACTACTGATTCAGTGACAGCAGTGGTTGCGGCAAAGGAGGAAGTAAAGCAAGCTGTTGCAGATGATCTGAACTCAACTCGTTCATCACCCTGTGAATGGTTCATCTGTGATGATGATGAGAATGGTACAAGATATTTTGTTATTCAGGGTTCTGAGTCATTGGCATCCTGGCAAGCAAACTTACTTTTTGAACCGGTTAAATTTGAGGGGTTGGATGTCCTTGTGCACAGAGGTATTTATGAGGCTGCTAAAGGGATATATCAACAGATGTTACCGGAAGTTCTTGCTCACCTAAAATCTCAAGGTTCTCGTGCAACTTTCCGATTCACCGGACATTCTCTTGGTGGAAGCTTGGCATTACTTGTAAATCTCATGCTGTTGATAAGACAAGAAGTGCCAATCTCCTCATTACTTCCTGTGATAACCTTTGGTTCCCCATCCATCATGTGTGGAGGTGATAGTCTGCTAGACAAGCTAGGTTTGCCACGGCGTCATGTTCAAGCAATTGTAATGCACAGAGACATAGTTCCACGAGCATTTTCTTGCAATTACCCTGACCATGTCGCAAAACTATTAAAGGCTGTGAATAGGAACTTCCGCAATCATCCATGTCTCAATAACCAAAAGCTACTATATTCACCAATGGGTGAACTACTGATTCTACAACCAGATGAGAAATTTTCACCAAGCCATCATCTCCTGCCATCAGGTAGTGGACTATATCTTTTGTGTTGTCCTTTGTCAGAATCCAATGACACAGACAAACTACTCCGAGCTGCTCAATTGGTTTTCTTGAACTCACCTCATCCACTTGAGATATTAAGTGACCGATCTGCTTATGGATCTGAAGGAAGCATTCAAAGAGATCATGACATGAATTCATACTTAAGGTCTGTGAGAACTGTGATTCGCCAAGAACTTAACCAGATCCGGAAAGCAATGAGAGAGCAACGGCGAAAGGTGTGGTGGCCTCTCGTGTTGCCACGTGGAATTGATGCCAACATTGTTGTTGGAAGGTCCATGATATCAGTCAATATGGGTCAACGGAAATCTCCCTTCTCAGGCATGATACAAACAGGGAGAGAGTCCTTGAAAAGGTTCAGTAGGCTTGTTGCATCCCAACACATGCATTTATTTGTGTTGCTCTTATTCCCTGCTAGGTTGTTACTATTGGGGGCATATAGTGTGATTAGCCTCAAATGA 2166 0.4575 METMCLKSGIVPPISIGGSLDVRPNPSQVSAVGRSAAEKPPQKSVFSRFSFRYPLESLWPRPRGSGNSRLSGLDLDDAVLAENGEGKAVRDDVDDEAVNGVEGQSRNWVLKILHVKSVWKGEQGNGDDAGDEGEGTANDQNNDYDEVCEACTVDEDEAEDDDEEEVQFDKDSFSRMLRRVSLAEARLYAQMSHLGSLAYSIPKIKPGKLLKHYGLRFVTSSLEKKELAAAATAEKNPQEIEADKKEEEEERKELNNGGYKISASAAYNIAASAASYLHAQTRSILPFKSSNAAAGDESPERSNESFDSVNMLNSEVASLMATTDSVTAVVAAKEEVKQAVADDLNSTRSSPCEWFICDDDENGTRYFVIQGSESLASWQANLLFEPVKFEGLDVLVHRGIYEAAKGIYQQMLPEVLAHLKSQGSRATFRFTGHSLGGSLALLVNLMLLIRQEVPISSLLPVITFGSPSIMCGGDSLLDKLGLPRRHVQAIVMHRDIVPRAFSCNYPDHVAKLLKAVNRNFRNHPCLNNQKLLYSPMGELLILQPDEKFSPSHHLLPSGSGLYLLCCPLSESNDTDKLLRAAQLVFLNSPHPLEILSDRSAYGSEGSIQRDHDMNSYLRSVRTVIRQELNQIRKAMREQRRKVWWPLVLPRGIDANIVVGRSMISVNMGQRKSPFSGMIQTGRESLKRFSRLVASQHMHLFVLLLFPARLLLLGAYSVISLK. 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06681 721 CDD Lipase_3 348 508 - -
Seca8g06681 721 Gene3D alpha/beta hydrolase 305 534 IPR029058 -
Seca8g06681 721 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 27 710 IPR043367 GO:0008970
Seca8g06681 721 Coils Coil 230 250 - -
Seca8g06681 721 MobiDBLite consensus disorder prediction 237 254 - -
Seca8g06681 721 Pfam Lipase (class 3) 367 504 IPR002921 GO:0006629
Seca8g06681 721 Coils Coil 621 641 - -
Seca8g06681 721 MobiDBLite consensus disorder prediction 122 144 - -
Seca8g06681 721 SUPERFAMILY alpha/beta-Hydrolases 350 542 IPR029058 -
Seca8g06681 721 MobiDBLite consensus disorder prediction 229 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06681 Seca-Chr8 161437049 161440751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06681 1 721 Acyl Lipid Metabolism Gene Families AT1G02660 57.432 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06681 - - gmx:100807834 1069.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06681 8 161437049 161440751 Seca8g06681 8 161437049 161440751 ECH
Seca8g06681 8 161437049 161440751 Seca2g05102 2 137479657 137483358 PCT