Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06669 ATGGGAGCAGATGAAGTACCACTGGACGACAAGGCAAAGAGGATGAGAGATCTGTTATCCAGTTTCTACTCTCCAGACCCTTCTATGTCCTCCAACTCTGGCAACGCCTCTTCCAAATACGCCTCTCTCGACGACATTAACTCCACCTCTTTCGATCCCGATCAGTACATGAATATCCTGGTACATAAGTCCAATTTGGAAGGGCTACTCCAGCGGCATGTTGAAATGGCAGCTGAAATAAAGAATCTCGACACTGACTTGCAAATGCTTGTCTATGAGAATTACAACAAGTTCATCAGCGCTACAGATACCATAAAGAGGTTTGCAGATAACAATTTCTACCTTGACAGGATGAAGAGTAACATTTCAGGGATGGAGGCGAATATGGAACAGCTTCTTGAGAAGATTGTGTCAGTGCAGTCAAGGAGTGACAATGTTAATACTTCTCTATTTGACAAAAGAGAGCATATTGAGAAACTGCATCGGACTTGCAATCTTCTCCGTAAAGTTCAGTTCATATATGATCTACCTGATAGACTTGGCAAGTGCATCAAATCAGAGGCCTATAAAGACGCGGTCAGGTTTTACACAGGAGCAATGCCAATTTTTAAGGCATATGGAGATTCATCATTCCAGGATTGTAAGCAGGCATCTGAAGAAGCAATGGCTATCGTAGTAAAAAACTTGCAGGGGAAGCTATTTTCAGATTCTGAATCAATACAAGTGAGAGCTGAGGCTGCAGTGCTCCTTAAGCAGTTGGATTTTCCGGTGAACAATTTGAAGGCAAAGTTACTGGAGAAGTTAAAACAATCTATCACAGGCATTCAGCTGAACCCTGAAGAAATAAACAATGCTTCAGGGGACCATTCTCCTTCAGCATCTGCTCATGAGGCAGCCATTCATGAATTTGTGGAGGCAGTTCGTGCTTTTCGAGTAATATTTCCTGATTCAGAAGAGCAGTTGATTAAACTTGCTCAGGACTTGGTTACTGAGAACTTTGTAATTACCGAGGAATATGTAAAGACACGGATTTGCCCAGCAGATCTACTTGGTGTTCTTCGAGTTATCTGGAATGATGTACTCCTGATAGATGAAGTCTTACAGGAAGCAGATCTCTCTAACCATTCGCTTGAGGTTGCTACAAAGGTTGTTGTCACGTATGTTAGAAGTGTATTTTCTCATCTTCTGCAAGATATCTCTGATGCCCTCTTACAAGTCCTGAAAAAGGATGGAGCAGAGCAGTACTCTCTCGAAGTTGTTTTTGATGCTAGTACGAAAGCAGTCCTCCAAGGAGCCATGAATGTCTTGCTGCATTTAATCTCTCTCCTTCAGGACTTTCGCAAAATTTTAGATGATGACACTGGGATCCTAGTTAGACTAAGAGAGACATTCATTGATTGGGTTCAAGAAGGATTTCAAGACTTTTTTAGGCAACTTGAAGATCAGTTCATTCTGTTTTCAGGAAGAAATAGTTCTGCTGCAGAGGGAGCTCAAGGTGACAAAACTTCTGCTGGCCTCGTCCTAGTGCTGGCACAATTGTCTGCCTTTATTGAACAAACTGTCATTCCAAAAATCACTGAGGAAATAGCTGCTTCCTTTTCTGGTGGTAGCGTTAGAGGACATGAATTTGGACCTGCCTTTGTTCCTGGAGTAATCTGTCGAAAATTTCGATCAGCTGGTGAAAAGTTCCTGCAGCTGTACATAAATATTAGAACTCAGAGAATATCACTTCTTCTGAAGAAGAGGTTTACCACACCTAATTGGGTTAAGCATAAGGAGCCAAGAGAAGTTCATATCTTTGTTGATTTATTTCTTCAAGAGCTTGAAGTTATAGTTATGGAAGTGAAGCATATTTTGCCTCGAGGTATACGTAAGCACCACAGGACTGATAGTAATGGAAGTAGCGCTTCATCAAGGAGCAACCCCCTGCGGGAGGAGAAATTGGGAAGGTCATATACTCAAAGGGCAAGGAGCCAGCTTTTGGAAACACATCTAGCAAAGCTTTTTAAGCAAAAAGTTGAAATTTTCACAAAAGTAGAATATACACAGGAGTCTGTCATTACAACTATAGTTAAATTGTGCCTTAAAAGTTTACAAGAATTTGTCCGACTTCAGACTTTTAACCGGAGTGGATTCCAGCAAATTCAGCTGGATATCCAGTTCTTAAGGATCCCTTTAAGGGAAATAGTTGAAGATGAAGCTGCAATCGACTTCTTGCTTGATGAGGTTGGAAATATAGTTTTTTGTTGGGTGATTGTTGCTACTGCAGAGCGGTGTCTCGATCCAATTCCGTTAGAGCCTCCCATACTAGACAAACTTATACAAGCAAAGTTGGCTAAAACCAAGGAACAAAATACAATCTCTTAA 2367 0.4128 MGADEVPLDDKAKRMRDLLSSFYSPDPSMSSNSGNASSKYASLDDINSTSFDPDQYMNILVHKSNLEGLLQRHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRFADNNFYLDRMKSNISGMEANMEQLLEKIVSVQSRSDNVNTSLFDKREHIEKLHRTCNLLRKVQFIYDLPDRLGKCIKSEAYKDAVRFYTGAMPIFKAYGDSSFQDCKQASEEAMAIVVKNLQGKLFSDSESIQVRAEAAVLLKQLDFPVNNLKAKLLEKLKQSITGIQLNPEEINNASGDHSPSASAHEAAIHEFVEAVRAFRVIFPDSEEQLIKLAQDLVTENFVITEEYVKTRICPADLLGVLRVIWNDVLLIDEVLQEADLSNHSLEVATKVVVTYVRSVFSHLLQDISDALLQVLKKDGAEQYSLEVVFDASTKAVLQGAMNVLLHLISLLQDFRKILDDDTGILVRLRETFIDWVQEGFQDFFRQLEDQFILFSGRNSSAAEGAQGDKTSAGLVLVLAQLSAFIEQTVIPKITEEIAASFSGGSVRGHEFGPAFVPGVICRKFRSAGEKFLQLYINIRTQRISLLLKKRFTTPNWVKHKEPREVHIFVDLFLQELEVIVMEVKHILPRGIRKHHRTDSNGSSASSRSNPLREEKLGRSYTQRARSQLLETHLAKLFKQKVEIFTKVEYTQESVITTIVKLCLKSLQEFVRLQTFNRSGFQQIQLDIQFLRIPLREIVEDEAAIDFLLDEVGNIVFCWVIVATAERCLDPIPLEPPILDKLIQAKLAKTKEQNTIS. 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06669 788 PANTHER UNCHARACTERIZED 7 785 IPR014812 -
Seca8g06669 788 MobiDBLite consensus disorder prediction 624 651 - -
Seca8g06669 788 Pfam Vps51/Vps67 46 132 - -
Seca8g06669 788 Coils Coil 115 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06669 Seca-Chr8 161256453 161265490 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06669 K20296 - gmx:100818891 1220.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06669 8 161256453 161265490 Seca8g06669 8 161256453 161265490 ECH
Seca8g06669 8 161256453 161265490 Seca2g05113 2 137599069 137605912 PCT