Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06656 ATGGATTACAGATTCAATAAAAGCCTTTTCCTCATCATCGCATCCCTCTCTTCTCTTCTCCTTCCCTCCAATGCCGTCCCTTCAAGTCGCATCTTTAACAGCAACAGCATCCCTCTCTCTCCCGCCAAATCCAAGCCAACCGTCAATCTGTTAGGCCTCCTCAATGTAGCTGCCAAAGCTGCCAAACAAATCAGTCCTGAAATCAGGGAATTCTGCACTGGAACAGAAAACCCTGCTCTCTGTGCTGAAACCGTTTCCAAACTCCATGGCGCTTTTGACCCTGTCAAGGCTCTTGTCGCTGAGATTGAAGCCACCTTCCGAGAGGCCAAGAACGTGGCTGCTATCATCGCGAGGTCACTCAGTGACCCTAAAACCGCTAAGAATGCCCTTGATGCGCTTGGAATCTGTAAGTCACAGTATAATGATATGTTGGATACAATAAAGGAGGCAGTGACGTTGGTGGAACAACAGAATATGGTGGATGCTTACTATAAGTTCAACGCTGTGATATCATACCGATCTGCATGTGAAGATGCTTTTACAGAGTCTCCAGGGGTTGACATGCCCTTCGTTAAGGATTCCCTCTCTCTGTATCAGTTGGGTGGTAATTGCCTGGCCATCATGGACGGCATAGTTAATCATCACAAGTTTTTGTAA 657 0.4688 MDYRFNKSLFLIIASLSSLLLPSNAVPSSRIFNSNSIPLSPAKSKPTVNLLGLLNVAAKAAKQISPEIREFCTGTENPALCAETVSKLHGAFDPVKALVAEIEATFREAKNVAAIIARSLSDPKTAKNALDALGICKSQYNDMLDTIKEAVTLVEQQNMVDAYYKFNAVISYRSACEDAFTESPGVDMPFVKDSLSLYQLGGNCLAIMDGIVNHHKFL. 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06656 218 Gene3D Invertase/pectin methylesterase inhibitor family protein 61 211 IPR035513 -
Seca8g06656 218 SMART PMEI_2 63 207 IPR006501 GO:0004857
Seca8g06656 218 CDD PMEI-like_2 65 211 - -
Seca8g06656 218 PANTHER PECTINESTERASE INHIBITOR-LIKE 26 211 - -
Seca8g06656 218 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 209 IPR035513 -
Seca8g06656 218 Pfam Plant invertase/pectin methylesterase inhibitor 68 207 IPR006501 GO:0004857
Seca8g06656 218 FunFam Invertase/pectin methylesterase inhibitor family protein 65 211 - -
Seca8g06656 218 NCBIfam pectinesterase inhibitor domain 59 209 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06656 Seca-Chr8 161157724 161158446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06656 - - gmx:100793343 219.935