Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06645 ATGTGGAATTTGTTGCAAGCCAGAGGAGAGGACTATGGGTTGAAGTCTTTGACAAGGGATGTGAGAACAAAGTTCAAAACCTTAGATGATATTTATGTGTGGCATGCTCTTTGTGGTGCCTGGGGTGGTGTGGACCCAGGAGCAACACACCTAAATTCAAAAATAAACCCATGTAAAATATCCCCTGGCCTTGAAGGGACAATGGATGATCTTGCTGTAGTAAAAATCGTTGAAGGTTCAATCGGCCTTGTTCATCTTCGTCCTGATCAAGCCAGCGACTTTTACAACTCTATGCACTCCTATCTTGCCAAATCAGGTATTACCGGAGTCAAAGTGGACGTCATTCATACTCTTGAGTTTGTGAGCCATGAATATGGAGGAAGAGTCGAGCTTGCCAAGGCATATTATGATGGATTGGCAAACTCCATTGTCAATAATTTTGATGGAAATGGAATCATCGCTAGTATGTAG 471 0.4268 MWNLLQARGEDYGLKSLTRDVRTKFKTLDDIYVWHALCGAWGGVDPGATHLNSKINPCKISPGLEGTMDDLAVVKIVEGSIGLVHLRPDQASDFYNSMHSYLAKSGITGVKVDVIHTLEFVSHEYGGRVELAKAYYDGLANSIVNNFDGNGIIASM. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06645 156 PANTHER - 10 156 IPR008811 -
Seca8g06645 156 Pfam Raffinose synthase or seed imbibition protein Sip1 11 156 IPR008811 -
Seca8g06645 156 SUPERFAMILY (Trans)glycosidases 13 154 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06645 Seca-Chr8 161099910 161104212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06645 13 156 Glycoside Hydrolase AT4G01970 59.310 5.00e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06645 K06611 - zju:107426117 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06645 8 161099910 161104212 Seca8g06645 8 161099910 161104212 ECH