Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca8g06595 | ATGGATGATTTTTCCAAGGGCATATGTGGTTGGAGTTGGAAGGAGAACAAAGTGTTTGAGCTGGCTTTAGCCCTGGTAGATGAGAACCATCCAGAACGATGGGAGGTGGTTGCAGCCATGGTTGGAGGAGAAAAAAGTGCTGGGGACGTTCAAAAGCATTATGTGATCCTTTTGGAGGATTTAGAGCTTATAGAATCTGGAAAACTGGACCATAAACTAGGAGAAGCTCAGCCGTGTGTCCTAGTTGACCCTATAGAGTCCTTATGCTTGTCTGATAATAATGATACAAGCATGTAA | 297 | 0.4377 | MDDFSKGICGWSWKENKVFELALALVDENHPERWEVVAAMVGGEKSAGDVQKHYVILLEDLELIESGKLDHKLGEAQPCVLVDPIESLCLSDNNDTSM. | 99 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca8g06595 | 98 | SUPERFAMILY | Homeodomain-like | 11 | 65 | IPR009057 | - | |
| Seca8g06595 | 98 | Gene3D | - | 10 | 57 | - | - | |
| Seca8g06595 | 98 | FunFam | Transcription factor SRM1 | 5 | 71 | - | - | |
| Seca8g06595 | 98 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR-RELATED | 9 | 69 | IPR044636 | GO:0003700 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca8g06595 | Seca-Chr8 | 160536439 | 160536735 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca8g06595 | - | - | var:108325196 | 164.081 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Seca8g06595 | 8 | 160536439 | 160536735 | Seca8g06595 | 8 | 160536439 | 160536735 | ECH | |
| Seca8g06595 | 8 | 160536439 | 160536735 | Seca8g06595 | 8 | 160536439 | 160536735 | PCT |