Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06555 ATGGGGGAACTGGTTCCAATCTACTTGTACGTCATCGCTTTCTTTTGCTCAAGTGGAGCCGTTGCCTTGGCCTTGCTACATATTTATAGGCACCTCATGAATTACACCGAGCCCACTTATCAGCGCTACATTGTTCGGATCGTTTTTATGGTCCCGGTTTATGCAACAATGTCATTCTCATCCCTTGTTCTACCTGAGAGTTCAATCTATTTTAATTCCATCCGGGAAGTCTATGAAGCTTGGGTCATTTATAATTTCCTATCACTTTGTCTTGCATGGGTTGGTGGTCCTGGAGCAGTGGTCCTAAGTTTAAGTGGTCGGGTTATGAAGCCATCATGGTTTCTGATGACTTGTTGCCTTCCTCCTATACCTCTAGATGGGCGTTTTATACGGAAGTGCAAGCAAGGGTGTTTGCAGTTCGTGATATTGAAGCCCATTTTAGTTGTTGTTACACTTATACTTTATGAGAAGGGGAAATATAAGGATGGCAATTTCAGTCCCAAGCAATCGTACTTGTATCTTACGATCATATATACATTCTCATACACAATGGCTCTCTGTGCTCTTTTTTTGTTTTATGTGGCATGCAAGGATCTGCTTCATCCATTCAATCCAGTCCCAAAGTTTATAATAATAAAATCTGTTGTATTCCTGACTTATTGGCAGGGTGTGTTAGTCTTCCTCGCTGCAAAGTCAGAATTCATTAAGGATGCAGATGAAGCTGCTCTACTTCAAAATTTTATCATTTGTGTTGAGATGCTTGTTGCTGCTGTGGGCCACTTTTATGCATTTCCATACAAAGAGTATGCTGGTGCTAACATAGGTGGATCTCGTGGTTTGACTGCTAGCCTTAGTCATGCTTTGATGTTAAATGACTTTTACCATGACACAGTCCACCAGTTTGCACCAACATATCATGATTATGTTCTCTATAACCACGGTGAAGGTGAAGAAGGACCAAGAAAGTATAGGTCACGAACTTTTGTTCCAATTGGCTCAGAGATGGAGACTGTGAGAAGAAATAAGCATATGGTTGGAAACAAGTTCGACGACACACAGCTGTCAAGTTTCACTTCTTCTAATAGTAGCACTCCCTCACATTCGGGTCCCATCTCTGATGTCCCACATTCTGGTGCAGCGAAGTCTTCCTTACTTGTGGATGTTTCAAATTCTGTATCTGTGCCATACGATTTTACACTCATTGACTTGGATGCATCCGATTACCCTGAAAAAGTTCCACCAGCTGATAAAGCTGGTACTAGGTAA 1266 0.4171 MGELVPIYLYVIAFFCSSGAVALALLHIYRHLMNYTEPTYQRYIVRIVFMVPVYATMSFSSLVLPESSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVMKPSWFLMTCCLPPIPLDGRFIRKCKQGCLQFVILKPILVVVTLILYEKGKYKDGNFSPKQSYLYLTIIYTFSYTMALCALFLFYVACKDLLHPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSEFIKDADEAALLQNFIICVEMLVAAVGHFYAFPYKEYAGANIGGSRGLTASLSHALMLNDFYHDTVHQFAPTYHDYVLYNHGEGEEGPRKYRSRTFVPIGSEMETVRRNKHMVGNKFDDTQLSSFTSSNSSTPSHSGPISDVPHSGAAKSSLLVDVSNSVSVPYDFTLIDLDASDYPEKVPPADKAGTR. 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06555 421 Pfam Organic solute transporter Ostalpha 10 269 IPR005178 -
Seca8g06555 421 MobiDBLite consensus disorder prediction 351 371 - -
Seca8g06555 421 MobiDBLite consensus disorder prediction 351 375 - -
Seca8g06555 421 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 8 357 IPR005178 -
Seca8g06555 421 SMART Solute_trans_a_2 9 269 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06555 Seca-Chr8 160067639 160072927 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06555 - - gmx:100789701 741.495