Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06540 ATGGCAGGCAACAGGCAAAGGAAATCTTCAGCTTTCAGGTCTGTTTTCAACATTTTCAAATCTAACAACAGGCACAGAGGAGGGTATAGTGATGCTTATGATGATGGGCCAAAGCAATGGACCAAAGTTTGGCCTAGTGATGAGGACAGAGGTAGCTGGGGTGTAGCTGATCCTGTCATTGATATGAGAGCTACAGCTTTCATTGCTCAATACAAGAAAAAGATTTCAGAGTCTGAAATTCACTGTCAAGCTCAAGCCCAGCAAAGAGTAGTCATCATGGGAGGTAATAGACAGAAGAAGTCTTCTTCTTCTTCTTCTTCAGGTCTCTTCTCCATTTTCAACATCTTCTCATCTAAGAAGTCCAGAGCAGGGCACTATTATGATGCCTATGATACTGGGCGCATTAAGGTCTGGCATAGTGATGATGATAAAGGTAACTGGGGTGTTGCAGAGCCTGGTATTGACATGAAAGCTGAAGCTTTCATCAGAGAGTACAAGAAACGTTTTTCACAATCTGAATGCTACCAACTTGACCCAGCTGCTGAAAATTAA 552 0.4257 MAGNRQRKSSAFRSVFNIFKSNNRHRGGYSDAYDDGPKQWTKVWPSDEDRGSWGVADPVIDMRATAFIAQYKKKISESEIHCQAQAQQRVVIMGGNRQKKSSSSSSSGLFSIFNIFSSKKSRAGHYYDAYDTGRIKVWHSDDDKGNWGVAEPGIDMKAEAFIREYKKRFSQSECYQLDPAAEN. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06540 183 PANTHER OS06G0632400 PROTEIN 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06540 Seca-Chr8 159867415 159873869 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06540 - - lja:Lj1g3v4807580.1 125.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06540 8 159867415 159873869 Seca2g05213 2 138625498 138632341 PCT