Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06534 ATGGCTTCCTACGACCACCATCCCAATCACAACCACCCAAACGGCGACGTTTCCAAGAAGCCAAGGTTGTGCTCTTCCACCATCACCGACTCCGAGATTCAATCGGAATTCTCGCACCACGACCCCAACGTCGCTCGCCTCAACAACGGCGCCTTCGGTTGCTGCCCTGCCTCCGTCATCACCGCGCAGCACCAATGGCAGCTCAAGTTCTTCCGCCAACCAGATCACTTCTACTTCAACGACCTCAAGAAAGGGATCCTCCGCTCCAGAACCATCATCAAGGAACTCGTCAACGCTCAACACGTCGACGAGATCTCCATCGTCGATAACGCCTCCACCGCCACCGCCATCGTCCTCCAACAAGCCGCCTGGGCCTTCCACGAAGGAAGGTTCCGTAAAGGCGACGCCGTCGTCATGCTCCACTACGCCTACGGAGCCGTCAAGAAAGCCATCGAAGCTTACGTGGCACGCGCCGGTGGCAGAGTCATCGAGGTTCCCCTTCCCTTTCCTGTAACTTCCGAAAACGACGTCGTCAGCGAATTCCGTAGCGCGCTTGAGAGAGGAAAAAACAGCAATAACAGAGTGAGGTTAGCGGTTATCGATCACGTGACTTCGATGCCGAGCGTGGTGATTCCGGTGAAGGAATTGGTCAAGATTTGCAGAGAGGAAGGCGTTGACCAGGTTTTCGTGGACGCGGCTCATGCTATTGGATGCACTCACGTTGATATGCAGGAGATTGGGGCTGATTTTTACACAAGCAATTTGCATAAGTGGTTCTTTTGCCCACCTTCCGTTGCTTTTCTCTACGCGCGTCGAAGATCCCCTAATTCTCGTGATTTGCACCACCCTGTGGTGTCTCATGAGTACGGGAATGGGTTAGCTGTGGAAAGTTCTTGGGTTGGGAATAGGGATTACAGTGCTCAGTTGGTAGTTCCTGCGGTTATGGAATTTGTTAATAGGTTTGAAGGTGGAATTGAAGGGATCAAGAAGAGGAATCATGATGAGGTTGTTAAGATGGGTGAGATGCTTGTGGCGGCTTGGGGGACTCATCTTGGGAGTCCTCCTCATATGAGTGCTAGCATGGTTATGGTTGGTTTGCCTGCTTGCTTGGGGATTAAGAATGATTCGGATGCTCTCAAATTGAGGACGCATTTGAGGGATGAGTTTGGGGTTGAAGTTCCGTTATATTTTCGAGCGCCAAGAGATGGAGAAGTTGAACCGGTAACTGGATATGCCCGAATTTCTCATCAGGTTTATAATAAAGTGGATGACTATTACAAGTTCAGGGATGCAGTTAACCAACTCTTGAAGCGTGTCAAGTTACCTGCAAGCTTCACTAGTTATGATGGTTTCGGTACCATGGACTCTGTTTTTGTAGAGAAACTGCATCAATAA 1395 0.5047 MASYDHHPNHNHPNGDVSKKPRLCSSTITDSEIQSEFSHHDPNVARLNNGAFGCCPASVITAQHQWQLKFFRQPDHFYFNDLKKGILRSRTIIKELVNAQHVDEISIVDNASTATAIVLQQAAWAFHEGRFRKGDAVVMLHYAYGAVKKAIEAYVARAGGRVIEVPLPFPVTSENDVVSEFRSALERGKNSNNRVRLAVIDHVTSMPSVVIPVKELVKICREEGVDQVFVDAAHAIGCTHVDMQEIGADFYTSNLHKWFFCPPSVAFLYARRRSPNSRDLHHPVVSHEYGNGLAVESSWVGNRDYSAQLVVPAVMEFVNRFEGGIEGIKKRNHDEVVKMGEMLVAAWGTHLGSPPHMSASMVMVGLPACLGIKNDSDALKLRTHLRDEFGVEVPLYFRAPRDGEVEPVTGYARISHQVYNKVDDYYKFRDAVNQLLKRVKLPASFTSYDGFGTMDSVFVEKLHQ. 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06534 464 MobiDBLite consensus disorder prediction 1 17 - -
Seca8g06534 464 Gene3D - 72 324 IPR015421 GO:0003824
Seca8g06534 464 PANTHER L-CYSTEINE DESULFHYDRASE 29 440 - -
Seca8g06534 464 MobiDBLite consensus disorder prediction 1 23 - -
Seca8g06534 464 Pfam Aminotransferase class-V 80 273 IPR000192 -
Seca8g06534 464 SUPERFAMILY PLP-dependent transferases 37 439 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06534 Seca-Chr8 159826200 159829082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06534 K22207 - gmx:100786129 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06534 8 159826200 159829082 Seca8g06534 8 159826200 159829082 ECH