Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06512 ATGGATCCCAATCAGTCTGTAGTTGAAAACTACGCCAATCCAAAGACTTGCTTCTTTCATGTTCTCTTCAAGGCTGCAGCCTTGGCATTTTACATTCTCTCGGCCCTCTTTATTGATAACTTTGTCATCATTTTTGTGGTGACCGTCCTTCTTGCCGCTCTTGATTTTTGGGTAGTCAAGAATGTGAGTGGGCGGATTTTAGTTGGTTTGAGATGGTGGAATGAAATAAATGATCTGGGTGAGAGTGTTTGGAAATTTGAGTGTCTTGACCAAGAGTCATTGGCTCGGATGAACAAGAAAGATTCATGGCTTTTCTGGTGGACCCTTTATCTTACGGCAGTTTCATGGATTGTGCTGGGAATATTCTCACTAATAAGGCTTCAGGCTGATTATCTCCTTGTTATAGGAGTTTGTTTGACCCTCAGCATTGCAAATATTGTTGGTTTCACCAAATGCAAAAAAGATGCTAAGAAGCAGTTTCAACAATTTGCCACTCAGACAATTGCCACTCGGTTCTCATCTACCTTACAGTCAGCATTCAGTGTTGTCTGA 552 0.4149 MDPNQSVVENYANPKTCFFHVLFKAAALAFYILSALFIDNFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFECLDQESLARMNKKDSWLFWWTLYLTAVSWIVLGIFSLIRLQADYLLVIGVCLTLSIANIVGFTKCKKDAKKQFQQFATQTIATRFSSTLQSAFSVV. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06512 183 Pfam Eukaryotic protein of unknown function (DUF846) 13 152 IPR008564 GO:0016020
Seca8g06512 183 PANTHER UNCHARACTERIZED 6 179 IPR008564 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06512 Seca-Chr8 159552031 159555503 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06512 K26752 - gmx:100499702 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06512 8 159552031 159555503 Seca2g05236 2 138847651 138850567 ECH
Seca8g06512 8 159552031 159555503 Seca8g06512 8 159552031 159555503 ECH
Seca8g06512 8 159552031 159555503 Seca2g05236 2 138847651 138850567 PCT