Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06507 ATGTCTCTGGTGACTGAAGAGATCAAAGCCAGATCAGAGGTATACCATGGAGATGAGCTCTGCCAAGAGAAGTCCAAGTCGCTGCTGAAGGAAATAGGACTACCAAATGGCCTCTTGCCATTGAAAAACATGGAAGAATGTGGGTATGATAGGGAGACAGGGTTCGTGTGGCTTAAGCAGATGAAGAGCACAAACCACAAGTTTGAGAAGATAGGGAAGCTGGTGTCCTATGCTCCAGAAGTTACTGCCTATGTTGAATTTGGTAAGATAAAGAAGCTAACTGGTGTGAAGACAAAGGAGCTATTGGTTTGGATGACACTGAGTGATATCTATGTGGATGATCCACCCACTGGCAAGATCACATTCAAGACACCTGCAGGGCTTTTCAGGACATTCCCAGTCTCAGCTTTTGAAATCCAAGAGGAACCGGTAATTAATAATAAGGAACTCAAAGATGAAGAAAACAAACAAGTCAATGAAACTGCCCCTGCTCATGCTGTTGAAGTCAAAGAGATCTGA 519 0.4374 MSLVTEEIKARSEVYHGDELCQEKSKSLLKEIGLPNGLLPLKNMEECGYDRETGFVWLKQMKSTNHKFEKIGKLVSYAPEVTAYVEFGKIKKLTGVKTKELLVWMTLSDIYVDDPPTGKITFKTPAGLFRTFPVSAFEIQEEPVINNKELKDEENKQVNETAPAHAVEVKEI. 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06507 172 Pfam Protein of unknown function, DUF538 27 138 IPR007493 -
Seca8g06507 172 PANTHER T31J12.3 PROTEIN-RELATED 22 140 IPR007493 -
Seca8g06507 172 Gene3D - 5 148 IPR036758 -
Seca8g06507 172 SUPERFAMILY At5g01610-like 3 143 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06507 Seca-Chr8 159513381 159513899 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06507 - - gmx:100500427 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06507 8 159513381 159513899 Seca8g06507 8 159513381 159513899 ECH
Seca8g06507 8 159513381 159513899 Seca2g05241 2 138866738 138867238 PCT