Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06469 ATGAGGACAGGGTCCTTGGTTTTTTCCTTACTGCAAGTACCCGGATTCAGAATACACAATGTAGCTAATTATAGAGATAAAGCATTGTACAGTATTAGAAGGACTTATGGAAGCAATTCTAGCATCAGGCTGCTTGGTTCTAGAATTTATTGGCTTGAGGGAGGACTCAGTAATAAGTGGAATCAAAGACTTGTAGCTACAAAGGCAGAAGGAAGTAAACACATCACTGGGAAGACCAAGTCAAAAAGTAGCAAGCATGAAATCTTGAGTGAGGCAATTTTAACAAGTGGCACAACAACCACTGTAAATAAAACAAAGCTAGATCAATTCCAGACAATTCAGTGCCCTGAAGTACAAGAGATTGCTCAGTATAAAAACTTATCTGACTTGGTCACTGTTATTGTCTTTGATCTTGAGACTACTGGGTATAGCAAAGTAAATGAACGAATAGTTGAGATTGCACTTCGAGATCTCCAGGGTGGTGAGAACAGCACTTTCCAAACTCTTGTAAATCCTCAACGCTATGTTCCTAATTCACATATTCATGGAATTACTACCAATATGGTCAATAGTCCTGATGTTCCAAGGATGGAGGACCTGATTCCCATCTTATTGAAGTACATTCAAAGCCGTAAGAAACATGGGGGATATGTGTTATGGGTTGCTCACAACGCTCACCTTTTCGATGCACCTTTACTCATTCATGAGTTTATTCGTTGCTCCACAGAGGTTCCTCGTAATTGGCTGTTTTTGGACACCCTTCCTTTGGCACGTCAACTGATGAAGTCTGGTGGGTATCTTTCTCTCTGTTTCTCTTTAAAACACACACATAAACACTTGCTGTTTAGAGGGAAAAACCTTTCTTCAATATCCCTTGCAGCCCTTTGTGAGTTCTACAGAATTAAAGTGGATGGATCAGCTCACAGGGCCATGGTAGATGTAATGACATTGTCCCAGATACTTCCTATGTTGACCTTTGATCTGAAGTTGACATTATCTGACCTTGTCAAAAAATCATTGAGCATATCAGATTTGATGAACAACAAGAAGAAAAAGAATTCAGACTAG 1068 0.397 MRTGSLVFSLLQVPGFRIHNVANYRDKALYSIRRTYGSNSSIRLLGSRIYWLEGGLSNKWNQRLVATKAEGSKHITGKTKSKSSKHEILSEAILTSGTTTTVNKTKLDQFQTIQCPEVQEIAQYKNLSDLVTVIVFDLETTGYSKVNERIVEIALRDLQGGENSTFQTLVNPQRYVPNSHIHGITTNMVNSPDVPRMEDLIPILLKYIQSRKKHGGYVLWVAHNAHLFDAPLLIHEFIRCSTEVPRNWLFLDTLPLARQLMKSGGYLSLCFSLKHTHKHLLFRGKNLSSISLAALCEFYRIKVDGSAHRAMVDVMTLSQILPMLTFDLKLTLSDLVKKSLSISDLMNNKKKKNSD. 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06469 355 Gene3D - 131 335 IPR036397 GO:0003676
Seca8g06469 355 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 58 353 IPR040393 GO:0008408
Seca8g06469 355 Pfam Exonuclease 134 320 IPR013520 -
Seca8g06469 355 SUPERFAMILY Ribonuclease H-like 129 328 IPR012337 -
Seca8g06469 355 CDD DEDDh 134 321 - -
Seca8g06469 355 SMART exoiiiendus 132 330 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06469 Seca-Chr8 159089942 159092343 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06469 - - gmx:100807138 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06469 8 159089942 159092343 Seca8g06469 8 159089942 159092343 ECH