Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06203 ATGGGTATTGTTGTTGGGAGAAAGAGAAGGTACTCCTGTTCCTCCAATCCTCTTCATGTCATCACTTTCTCCCTCACAATATTACTTCTTCTACAAAGGGCTGTGGCTGAATCCAGTGTCCTAAATTTAACAAGGCATAGGCAAGTGAGCAGCTTGAGACTTGAAAGGATTAGTAAACACTTGGACAAGATTAACAAGGCTCCTGTTCTCACCATAGAGAGTCCAGATGGAGATCTTATAGACTGTGTTCACACAAGAAAACAACCAGCTTTTGATCACCCCCTTTTAAAGAATCACAAGATTCAGAAAGTGCCAACGGAGATGCCAAAAGGGATATTGATGAAGAAAGAAGAGGAAGGTGGGAATGTGAAGGAGGAAAATATAGGAGAGGCATGGCAAATGTGGCATAGAAATGGGACACGGTGTCCAACGGGAACGGTTCCCATACGGAGGAGCACAGTGGATGATGTGTTGAGAGCAAAATCTTTGTATGACTTTGGGAAGAAACCGCCACGAATTCCCCTTATCTCTCGCCGTAATGATTCCCCCGATGTTCTCAGTGACAATGGTCATGAGCATGCGATCGCTTACACTACGGGATCATCGCAAGAGATGTACGGTGCAAAAGCATCTATAAATGTGTGGGATCCATCAATTCAAGTGATGAACGAGTTCAGTCTCTCACAGATTTGGATCCTTTCAGGATCATTCGATGGTCCTGATCTTAACAGCATCGAAGCTGGATGGCAGGTCAGTCCGGAGCTCTATGGTGACAGCAGGCCCAGATTATTCACTTATTGGACGAGGGACTCGTACAGATCAACAGGATGTTACAACCTTCTTTGTGCTGGTTTTATTCAAACAAGTAGTAGAATAGCCATTGGAGCTGCCATTTCCCCAGTCTCTTCTTATGCTGGCAACCAATATGACATTACGATCCTCATTTGGAAGGATCCAAAAGTGGGGAATTGGTGGATGAGTTTTGGTGAAGGCACATTGGTAGGGTATTGGCCTGCAGAGCTATTCACAAACTTAGCTGACCATGCCACCATGGTGGAGTGGGGTGGTGAGGTGGTGAACTCAAGGGCCAGCGGCGACCACACCTCCACCCAAATGGGCTCTGGCCACTTTGCTGAGGATGGTTTCGGAAAAGCAAGCTACTTCAGGAACCTTGAGATTGTGGATGTTGATAACAGTCTAAGTTCTGTACAGAGCATCTCAACATTAGCAGAAAATACAAACTGTTACGATATTCAGAGCTCCTATAGCAATGAATGGGGCACATACTTCTACTATGGTGGGCCTGGGAAAAATCCTCAGTGCCCATGA 1329 0.4567 MGIVVGRKRRYSCSSNPLHVITFSLTILLLLQRAVAESSVLNLTRHRQVSSLRLERISKHLDKINKAPVLTIESPDGDLIDCVHTRKQPAFDHPLLKNHKIQKVPTEMPKGILMKKEEEGGNVKEENIGEAWQMWHRNGTRCPTGTVPIRRSTVDDVLRAKSLYDFGKKPPRIPLISRRNDSPDVLSDNGHEHAIAYTTGSSQEMYGAKASINVWDPSIQVMNEFSLSQIWILSGSFDGPDLNSIEAGWQVSPELYGDSRPRLFTYWTRDSYRSTGCYNLLCAGFIQTSSRIAIGAAISPVSSYAGNQYDITILIWKDPKVGNWWMSFGEGTLVGYWPAELFTNLADHATMVEWGGEVVNSRASGDHTSTQMGSGHFAEDGFGKASYFRNLEIVDVDNSLSSVQSISTLAENTNCYDIQSSYSNEWGTYFYYGGPGKNPQCP. 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06203 442 Gene3D - 214 331 - -
Seca8g06203 442 Pfam Neprosin 223 435 IPR004314 -
Seca8g06203 442 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 57 438 - -
Seca8g06203 442 FunFam Putative carboxyl-terminal proteinase 214 334 - -
Seca8g06203 442 Pfam Neprosin activation peptide 71 197 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06203 Seca-Chr8 156020095 156024856 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06203 - - gmx:100808774 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06203 8 156020095 156024856 Seca8g06203 8 156020095 156024856 ECH