Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06041 ATGGGGGGGATAAGAGAGGAAACGGAAATGGTAGTTGCGATATCATCTTCTTCATGTTGGATGGTAGCGCCATGGATTTTGAAGGCAAAACCTCTGACACTGAAGAGGCTCACTACTCTCAAATTCAAATGTTGCAAAGCCTCGCCACAGCCACATTGTTCTGTTGTTCCAAACGACGATCTGCAAGCTCTCTTACAGATCCTTCCATCTGATTTGCATCACACTCTCCTCAATCAACCAAACCGCCCTCAACTTTTAGAGGTTATATTGGATTTGGGCCGTTTTCCAGAAGCGCGTTATCTAGGAAAAGATGGAAGCCAATGTCTAAGGAATACAGAGGTAACGGTAAAGGAATTGGAATATGCTCAACAAGCTGTTGGAGAGTTTGGGAGGGACAATAGAGCTGGCATTGAGGGTACGTTGCACAGAATTTCTGCAATAAGGAGTAGGAATGGTGGCATAGTTGGTTTGACATGTCGAGTTGGGAGGGCAGTCAGTGGCCACATTGACATGGTTTATGATCTCCTTCAATATGGGAGGAGCATTTTATTTGTTGGAAGGCCTGGGGTTGGCAAGACTACTGTTATGCGGGAGATTGCTCGTGTACTGTCTGACGAATTTCACAAAAGAGTGGTGATTGTTGATACCAGCAATGAAATTGGAGGCGATGGAAATATTCCTCATGCAGCAATAGGGGGTGCACGAAGATTGCAGGTACCTGAACCATCAATGCAACATAGCATCATGATTGAGGCAGTAGAAAACCACACGCCTGAGGTGATTATAGTAGATGAGATTGGCACAGAAGCTGAAGCTCATGCTTGCCGGTCAATTGCTGAGCGAGGCGTCATGCTTATTGGGACTGCCCATGGACAGCAGCTTGACAACATCATGAAGAATCCTACACTCTCTGATCTGATTGGCGGAATAGAAAGCGTTACTCTGGGAGATGCGGAAGCCAGAGCAAGAAATTGTCAGAAGACAATTCTTGAGAGGAAAGCTCCTCCAACATTTGATTTTTTGATTGAGATGAGAGATAGACACTACTGGCTTACACATCAGACTGACAAAAGTGTAGATATGTTGCTTCGAGGCAGAAGTCCACAGGTTGAGGTAAGAAAAAGAGATGAAAAAGGCAAGGTTGTGATAGAAAAATCTAAAGCCTATGATAACTGCCAAATTTGA 1185 0.4456 MGGIREETEMVVAISSSSCWMVAPWILKAKPLTLKRLTTLKFKCCKASPQPHCSVVPNDDLQALLQILPSDLHHTLLNQPNRPQLLEVILDLGRFPEARYLGKDGSQCLRNTEVTVKELEYAQQAVGEFGRDNRAGIEGTLHRISAIRSRNGGIVGLTCRVGRAVSGHIDMVYDLLQYGRSILFVGRPGVGKTTVMREIARVLSDEFHKRVVIVDTSNEIGGDGNIPHAAIGGARRLQVPEPSMQHSIMIEAVENHTPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGQQLDNIMKNPTLSDLIGGIESVTLGDAEARARNCQKTILERKAPPTFDFLIEMRDRHYWLTHQTDKSVDMLLRGRSPQVEVRKRDEKGKVVIEKSKAYDNCQI. 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06041 394 Pfam Sporulation stage III, protein AA 160 307 IPR045735 -
Seca8g06041 394 PANTHER KINASE-RELATED 58 381 - -
Seca8g06041 394 Gene3D - 162 363 IPR027417 -
Seca8g06041 394 CDD AAA 173 268 - -
Seca8g06041 394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 305 IPR027417 -
Seca8g06041 394 SMART AAA_5 178 334 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06041 Seca-Chr8 154029085 154035790 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06041 - - lang:109346179 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06041 8 154029085 154035790 Seca8g06041 8 154029085 154035790 ECH