Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05829 ATGGAAAGAGTCAAGATTTTTAATTTAATAACTCTCACTTTTACATTTCTTGCATTTGTGCCAAAGATGGAGAGCCAGATCAGGCCACCAGATTTTGCTTTGCCACAGCCATATCTTCACCCACTCTGTGCATCCCAACTAGCACTAGTAAGTTATGCTTGTGCAATGTTGCCTTTTACCCCAGGATCAGCACCTTCACCAATCACACACACACCTTTTCCTTCATCCCCTGATGATGATAAGGAGGAACACAGACAGGGCCACAGGCATGTCCATGGACACTGGCATATTCACCATCAAACTCAAACCTCTCAAGAAGACAACTGTTGCAGGTGGGCAAGGGAAATGGACAGCCAATGTGTGTGTGAAATTTTAGTTCGATTGCCTCCCTTTCTCACTAGACCTTTGCATCAGTACTCAGTCATCATTGGAGAATCTTGTAATGTCACTTACTCATGTGGTGGGCCAATATGA 474 0.4409 MERVKIFNLITLTFTFLAFVPKMESQIRPPDFALPQPYLHPLCASQLALVSYACAMLPFTPGSAPSPITHTPFPSSPDDDKEEHRQGHRHVHGHWHIHHQTQTSQEDNCCRWAREMDSQCVCEILVRLPPFLTRPLHQYSVIIGESCNVTYSCGGPI. 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05829 157 MobiDBLite consensus disorder prediction 67 86 - -
Seca8g05829 157 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 79 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05829 Seca-Chr8 150951951 150952424 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05829 - - pvu:PHAVU_007G170000g 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05829 8 150951951 150952424 Seca2g04207 2 126338711 126339217 PCT