Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05762 ATGCTGCTGAGGAACAGATCAAGAGCAGTGACCAAGCCAAGTTTGATGGGTGATCACAGTTCACAACCATCTCCAAATCAGAATTATGCTAGAACTATCCCATCTCTATTTGGCTCACCAAAATTTAGAGATTTCACCATCAAGTGTCTTTCAGGAGCTGAGGCTTTGAGAAGTCCAACATCAATTCTTGACACCAGAGCACTATCCCCATTTGGGAATCCTTTTTCACATGAAAAAAAGAATGAAGCTATTAGCTCCCCAAGAATGCACTCAGAAAACAGAAGTTCATGGGAGAAAGTAGATTCAGAAGGAATAGGCCTTGCTCTTGTGGGTGCACTAAAAGATGAGCCTTTTCATGAGAATTCTGCTAGACCAACCAACAAAAAAGTCCTGTTTGGAGCTAAGCTTAGAGTGAAAATCCCTCCCCTGCCACCTTCCCCGTTTGGTGCCAAAACCAAGGATTCACAAAACTTAGGAATTTATGCAAAGGATTCTCCACAAGCAGTTGCTACTGGTGTTCTGACTTTGAGTGAGATGGAGCTTTCTGAGGAGTACACTTGTGTGATATCCCATGGACCTAATCCGAAAACAACTCATATATTCGATAACTGTATTGTGGAAAGCTACTGTTCTGTGCCAAATAACCCCCACTCTCCTTCAGTGAATTTCCTTAACTTCTGCTACACTTGCAAGCAGCATCTTGAACAGACAAAGGACATTTTTATTTACAGAGGAGAGAAAGCTTTTTGCAGTCAAGAATGTCGCCACAAAGAAATGGTGTTAGATGAAGCAGAAAATTCAGAATTTGGTAGATACTAA 819 0.4139 MLLRNRSRAVTKPSLMGDHSSQPSPNQNYARTIPSLFGSPKFRDFTIKCLSGAEALRSPTSILDTRALSPFGNPFSHEKKNEAISSPRMHSENRSSWEKVDSEGIGLALVGALKDEPFHENSARPTNKKVLFGAKLRVKIPPLPPSPFGAKTKDSQNLGIYAKDSPQAVATGVLTLSEMELSEEYTCVISHGPNPKTTHIFDNCIVESYCSVPNNPHSPSVNFLNFCYTCKQHLEQTKDIFIYRGEKAFCSQECRHKEMVLDEAENSEFGRY. 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05762 272 MobiDBLite consensus disorder prediction 81 97 - -
Seca8g05762 272 ProSiteProfiles Zinc finger FLZ-type profile. 222 266 IPR007650 -
Seca8g05762 272 MobiDBLite consensus disorder prediction 1 33 - -
Seca8g05762 272 Pfam zinc-finger of the FCS-type, C2-C2 217 264 IPR007650 -
Seca8g05762 272 PANTHER FCS-LIKE ZINC FINGER 8 3 267 IPR044593 -
Seca8g05762 272 MobiDBLite consensus disorder prediction 14 33 - -
Seca8g05762 272 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05762 Seca-Chr8 149981210 149983113 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05762 - - gmx:100811607 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05762 8 149981210 149983113 Seca8g05762 8 149981210 149983113 ECH
Seca8g05762 8 149981210 149983113 Seca2g04269 2 127189526 127190777 PCT