Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05632 ATGGCTTTCAGAGGTCTCGGCCGGCCAAATGCTTCATCAGGCATGGGTGTTGCTGATCACAGCAAAAATGCTTTTGTGGAACTGAAGCTAAAGAAGGTCTATCGCTATGTGATCTTTAAGATTGATGAAAAGAAAAGGGAGGTTGTGGTTGAGAAGACCGGTGGTCCAGCTGAGAGCTATGATGATTTCACTGCATCTTTGCCTGAGAATGATTGCAGATATGCTGTCTACGACTTTGATTTTGTCACTTCTGAGAACTGTCAAAAGAGTAAAATCTTCTTCATTGCCTGGGTCCCCTTCAACATCTCGAATCCGTGCCAAGATGCTCTATGCCACGTCTAA 342 0.4444 MAFRGLGRPNASSGMGVADHSKNAFVELKLKKVYRYVIFKIDEKKREVVVEKTGGPAESYDDFTASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWVPFNISNPCQDALCHV. 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05632 113 CDD ADF_cofilin_like 13 99 IPR017904 GO:0015629|GO:0030042
Seca8g05632 113 Pfam Cofilin/tropomyosin-type actin-binding protein 22 102 IPR002108 GO:0003779
Seca8g05632 113 SUPERFAMILY Actin depolymerizing proteins 11 101 - -
Seca8g05632 113 Gene3D Severin 10 105 IPR029006 -
Seca8g05632 113 ProSiteProfiles ADF-H domain profile. 14 113 IPR002108 GO:0003779
Seca8g05632 113 PANTHER COFILIN-RELATED 10 99 IPR017904 GO:0015629|GO:0030042
Seca8g05632 113 SMART adf_2 19 112 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05632 Seca-Chr8 147950314 147953178 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05632 K05765 - twl:120010147 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05632 8 147950314 147953178 Seca8g05632 8 147950314 147953178 ECH