Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05630 ATGAGGGCTTCAAGTGAACAAGATTTTGATTATGAAGATGACCCTGACCTGACATTACTCTACCAGTTTTTGGGTTCTTTTTTTTCTTCTCTTTCTAATTTTGTTGTTTTGAAAAACCAGGAGAAGCTTAAAATGCGAAAGAAAAAGGCAGAGAAAGAAGGTGAAGGTCCTCCAGTGTTTTGGTTCGAAACCTCTGTCTCTGTTTGTCGCCGCTTCCAGTTTGAACCCAATGGCCAACTTTCTGTAAAGGTTGTTGGTGATTCCAGACCATTTTACCACAGGATGCTTGAGTTTTTCTTGAATAAATTTTTCCCCTCAGGATATCCATACAGCGTGAATGAAGGGTATCTTAGGTACACACAGTTTCGAGCACTGCAACACATGACCAGTGCAGCACTATCCGTGTTATCAACTCAGTCACTGCTATTTGCTGCAGGCTTGCGGCCCACTCCTGCACAAGCAACTGCTGTTAGTTGGATTTTAAAGGATGGTATGGAACATTTAGGGAAGCTATTATGTAGCAATTTGGGTGCAAGAATGGATTCAGAGCCTAAACGCTGGAGAATTCTAGCTGATGTGCTCTATGATTTAGGCACTGGCTTGGAAGTGCTTTCTCCCTTATGTCCACATCTTTTTTTCGAAATGGCAGGCCTAGGAAATTTTGCCAAGGGGATGGCAGCTGTTTCAGCAAGAGCTACAAGATTACCTATATATTCTTCATTTGCTAAAGAAGGAAATCTCAGTGACCTATATGCTAAAGGGCATGCTATATCAACTCTCTTTAATGTTGTTGGAATGGGAGTTGGAATTCAATTAGCATCTACTATATGCGCGTCAATGCAGGGAAAGTTGGTTGTGGGGCCTCTACTTTCAGTTATACATATATACTGCGTTTCTGAACAAATGAGAGCAACTCCTGTCAATACCTTAAATCCACAAAGAACTGCAATGATTGTGGCTGATTTTCTCAAGGCAGGAAATGTATCAAGCCCTGCTGATCTAAGATTTCGAGAAGATTTTCTATTTCCTGGGCGACTCATAGAAGATGCTGGAAATGTAAGAGTTGGTAGGGCTTTGCACAAGGTTATTAAGCCTTCAAGGCTTCTTGAACTAAAACAAGTATTCCCAGGGGAGAAGTTTCTTTTAAACCGTGAAAATGGATGCATTGACATGGTATTGGAGCAAGAAGCTATTGGTGAAGATGCATTGAGAGGGTGGCTAGTTGCTGCATATGCTGTACAAATTGATAAGTTCTCTCATGAGCTCAGTGCCAGTGTCCTGCTACAAGCCTATGAGAAAATGAATGGGGTCTTCCCTGTGTTTCTAAAAGAATTACAGAACAAAGGGTGGCATACGGATCGTTTTCTGGATGGAACTGGAAGCCGTTTTGCATTGTAG 1398 0.417 MRASSEQDFDYEDDPDLTLLYQFLGSFFSSLSNFVVLKNQEKLKMRKKKAEKEGEGPPVFWFETSVSVCRRFQFEPNGQLSVKVVGDSRPFYHRMLEFFLNKFFPSGYPYSVNEGYLRYTQFRALQHMTSAALSVLSTQSLLFAAGLRPTPAQATAVSWILKDGMEHLGKLLCSNLGARMDSEPKRWRILADVLYDLGTGLEVLSPLCPHLFFEMAGLGNFAKGMAAVSARATRLPIYSSFAKEGNLSDLYAKGHAISTLFNVVGMGVGIQLASTICASMQGKLVVGPLLSVIHIYCVSEQMRATPVNTLNPQRTAMIVADFLKAGNVSSPADLRFREDFLFPGRLIEDAGNVRVGRALHKVIKPSRLLELKQVFPGEKFLLNRENGCIDMVLEQEAIGEDALRGWLVAAYAVQIDKFSHELSASVLLQAYEKMNGVFPVFLKELQNKGWHTDRFLDGTGSRFAL. 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05630 465 Pfam Vitamin B6 photo-protection and homoeostasis 94 325 IPR006968 -
Seca8g05630 465 PANTHER RUS1 FAMILY PROTEIN C16ORF58 55 464 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05630 Seca-Chr8 147936137 147944402 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05630 - - gmx:100814176 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05630 8 147936137 147944402 Seca8g05630 8 147936137 147944402 ECH
Seca8g05630 8 147936137 147944402 Seca2g04377 2 128770657 128775154 PCT