Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05598 ATGTCTGGCAACAAGGTGAAGGGTCTTCTTAAAGGCCTTAGATACATATCTCAAATATTTGAAAATGAAAAAGAACAAGACATACAAATTGGATTTCCCACGGATGTAAAGCATGTGGCCCATATAGGATGGGATGGTCCATCTGTAAACTCTCCTAGTTGGATGAACGAATTTAAAACTACTCCAGGATTTGCATCAGCACCCATAAATCTTACTGGGGATGTTCAGAATAAAGGACAAGATAATTCAGTCAAATGGACCTCTGAAGATTCAAGGAGAAGAAGTTCGAGGTGTGTGAATTCTCAGGGTCAAGGGAGGGATCTGCCTGAGTTGCCCAAAGCATCTAGAAGGCAAGCAATGAGTAACAACATAGATTCTCCCACAAGAGAAAAGTCAGATAAGACAAGGCAATCAAGGAAGTCATCTAATAGAAATTCACAACTCAAGGATTCATCAGATGGATCAAAATCGAACCATCAACTTATGTCCATAGAAGGAGATGGGGTGCCAGAAATTCCCAAAAAGACTCGACGAAAGAAGTCCAAAGATAATTCTAATGGTGGTGGGTCTTCCAAATTAAGATCCAAAGCCCAACCCGCAGAGCCCAATTTGGATTTTGGAGAAAATGAGCAATGTGAAAGAGGAATGAGTGGGATATCTTGA 663 0.4072 MSGNKVKGLLKGLRYISQIFENEKEQDIQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKTTPGFASAPINLTGDVQNKGQDNSVKWTSEDSRRRSSRCVNSQGQGRDLPELPKASRRQAMSNNIDSPTREKSDKTRQSRKSSNRNSQLKDSSDGSKSNHQLMSIEGDGVPEIPKKTRRKKSKDNSNGGGSSKLRSKAQPAEPNLDFGENEQCERGMSGIS. 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05598 220 CDD CRIB 28 60 - -
Seca8g05598 220 MobiDBLite consensus disorder prediction 64 220 - -
Seca8g05598 220 MobiDBLite consensus disorder prediction 170 185 - -
Seca8g05598 220 Pfam P21-Rho-binding domain 29 77 IPR000095 -
Seca8g05598 220 Gene3D CRIB domain 23 62 IPR036936 -
Seca8g05598 220 SMART PBD_5 30 61 IPR000095 -
Seca8g05598 220 FunFam Elongation factor Ts, mitochondrial 23 68 - -
Seca8g05598 220 ProSiteProfiles CRIB domain profile. 30 43 IPR000095 -
Seca8g05598 220 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 4 200 IPR044510 -
Seca8g05598 220 MobiDBLite consensus disorder prediction 64 84 - -
Seca8g05598 220 MobiDBLite consensus disorder prediction 141 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05598 Seca-Chr8 147520819 147523321 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05598 - - psat:127092765 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05598 8 147520819 147523321 Seca8g05598 8 147520819 147523321 ECH
Seca8g05598 8 147520819 147523321 Seca8g05598 8 147520819 147523321 PCT