Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05589 GATAATAAATCTGAGGAACAACTAAGTGTCAGCAGCACTAGAAAAAAAGTAACTTTTGATTCCAATGTGAAAACCTACGAGCCTGTTTTGCAGGATGAAGTTGAGGGTTTGAGGAAGAGTGAAGAAGGTGGAAAGGAGCAAGCTTTGCCAAAACCAAGCCAATCAAAGTCGTCTTCTTCTGAAGATAGTTCTGTGACTTCAACGGGGTCTTACCCTCCAAATCACAGGTACCAGAATTGCAGGGACAGTGATGATGAAGATGAAGAACTTGATTATGGAGCAAGTGATCTTAGTGATGAGGATGATGACATCAGAGAAGAATGTGATGAATTGGGTGAGGATTTTGATGAAGATGGAATGACATACTCAAGGGCAACAACTGCTGCTGATCATGTGTTTGCTGAGGAAGTGGAGTGTCCAATTCCTACCAATGAAAAGGATGTGAAGTCAATTGGGTCCAACCCCAATGCTAGAGACAGAAGTGTCTATGTTCATCCTGTTCTGAACCCGGTTGAAAACCTCACTCAGTGGAAAGTTGTTAAGGCTAAAAGGACACCACCATCATTGAGGCCACAGAAAGAGAATCATGTTTCTTCCAAGCAGGATTTAAGCTTGAGTTCAGAAACTGACCCATCAAAGAAGTTGAACCAGGAAATCCCAGTTGATGCTAGCCTGTCAAATTGGTTGGCTTCATCTGAGACTACAACACCTGTTAACAAGGCTGGTTCGGTGGCTTTTTATGCTGGTACTCCTGACAGGTGCACCTCACAAGGTTCAAATTCTGTGATAAGCCATGAAGATAGGCCTATTTTAGGTGCATTAACAGTGGAAGAGCTCAAGCAATTTTCAGCTACTTCATCACCAAGGAAGTCACCTTGCCGGAGTCCAGATGAGATGCCCATTATAGGCACTGTTGGGACCTACTGGAATTCTTCAGCTTCTGCTCAGGATTCAGGCTCAGCCTCTTCCTTTAAAGGAATTCCAAACACAACAAGCAAGTATAGAGAGGATAAGAGAGTGAATTGGCACTCAACACCATTTGAGACAAGGCTAGAGAAAGCTTTGAATAGAGGTGCTGCTGCAGAAGCTGCTTCTTCTTATGTTCCTCATGTATTTTAG 1119 0.4325 DNKSEEQLSVSSTRKKVTFDSNVKTYEPVLQDEVEGLRKSEEGGKEQALPKPSQSKSSSSEDSSVTSTGSYPPNHRYQNCRDSDDEDEELDYGASDLSDEDDDIREECDELGEDFDEDGMTYSRATTAADHVFAEEVECPIPTNEKDVKSIGSNPNARDRSVYVHPVLNPVENLTQWKVVKAKRTPPSLRPQKENHVSSKQDLSLSSETDPSKKLNQEIPVDASLSNWLASSETTTPVNKAGSVAFYAGTPDRCTSQGSNSVISHEDRPILGALTVEELKQFSATSSPRKSPCRSPDEMPIIGTVGTYWNSSASAQDSGSASSFKGIPNTTSKYREDKRVNWHSTPFETRLEKALNRGAAAEAASSYVPHVF. 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05589 372 MobiDBLite consensus disorder prediction 31 46 - -
Seca8g05589 372 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 4 358 IPR039300 GO:0007142
Seca8g05589 372 MobiDBLite consensus disorder prediction 50 77 - -
Seca8g05589 372 MobiDBLite consensus disorder prediction 312 330 - -
Seca8g05589 372 MobiDBLite consensus disorder prediction 138 159 - -
Seca8g05589 372 MobiDBLite consensus disorder prediction 184 217 - -
Seca8g05589 372 MobiDBLite consensus disorder prediction 84 116 - -
Seca8g05589 372 MobiDBLite consensus disorder prediction 312 343 - -
Seca8g05589 372 MobiDBLite consensus disorder prediction 191 217 - -
Seca8g05589 372 MobiDBLite consensus disorder prediction 1 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05589 Seca-Chr8 147383156 147384508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05589 - - gsj:114380996 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05589 8 147383156 147384508 Seca8g05589 8 147383156 147384508 ECH
Seca8g05589 8 147383156 147384508 Seca2g05469 2 141132869 141135186 ECH
Seca8g05589 8 147383156 147384508 Seca8g05589 8 147383156 147384508 PCT
Seca2g05469 2 141132869 141135186 Seca8g05589 8 147383156 147384508 PCT