Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05464 ATGAATGTGGTAGGCAAAGTTGGAAGTTTGATAACCCAAGGTGTGTACTCAGTTGCTACCCCTTTTCATCCTTTTGGTGGGGCTGTTGATGTGATTGTTGTTCAGCAGCAAGATGGGACCTTTCGAAGCACTCCTTGGTATGTTCGGTTTGGTAAATTTCAGGGTGTGCTAAAAGGTGCTGAAAAAGTTGTTCGAATAAATGTTAATGGTGTTGAGGCCAACTTCCATATGTATCTTGACAATTCGGGGGAGGCTTATTTTGTGAAAGAGGTGGATGAGGAGGATAAAGGAGTTGAGTCAAATGGGGTTGTTCAAGATTCTAGTGACAAAAATAATAGTTATTTGAGTAGTGGTCATAGACTTGATCATAGCATCTCCGATTCTGGGGTGCTTCAGTTGAAGGATGAAGGTGATTCATCAGCTGTGCCTCGAATTCAAAGGACCGAATCTGATGGGAGATATTATGAATTCCAAGATGATCGATCTTCTTTTGAAGATTCAGTTGATTTGTCTGAATATGGGTCTAATTCATATGAAAGTCTAGAGGGAGAAAATTTTGTGGATTCACAGGGTTCCCACCCAGAGATGGTCTTGGTGAGTGTGGATGGTCATATATTGACGGCCCCTATCTCAGAATCAGAGCAGAATGAGGAGGATGTGGAGTTAAGAAATCCTCAATTTCATCTGGGCCCAGGTGAAGAGACAGACTTATGTGAAGGCAATGAAGACTTTAGTTCTGGTGAAAATGCTTGGGCTGCCGATTATATTAGTCAGCTGGATGCTCCAATAGCTGATGTCCAACCCCGACATTGTGACACTAATGGCAATGACAATACTTCCAGACTCCCGGTTGAAGTTTTTCAAGGTGAGGAGGTAAACATTTGTCGAGCACAGGAAACCTTGGAGGTTAAAAGTCAAGAAGATCCTCATATAAACACTGATTCAGAAGGGGTTGTGTCTGGTATCAAGAAGGAGAATGTTTTCAAAAGCTGTTTGGAGCTACAAGAACTTGCTCAGCAGGCTGGAAATGCTTATTCACGAGATGTAGGTTCATCAGCGGAGGTTCAAAATTCAGTGGAGGAATCTAATGCAACTTGTCCAGTAGTTGATGAAAATGAACAAGATAGCGTTGTACCATCTAAAAACATTGATGAGTTATCTCCCTCAAATGGTTCAACCTCTTCCAATGGCCTTAGATCTCCAAAATCAGAATCAGTACTTCAAGAGGTTGAGAAAAATGCATCAGGAGAAGTTGAAACTGCTTCTGGCTCTCATTCTGTTACTATTCATACTGAATGGAGAGATGAACAAGTTGGCAAATCAGTATCAAATGGCAGGGTAGATGAGAGTCAACAAACCACTGCACTTGAAGATATTAGTACTACAAGCAATGTAGTGGAACCTCAAACAGAAACTTCAAGTAAAGGCGATCAAAGCCATTCAGGTTTGGGATTTGAGATCTCGCTTTGTGGTCATGAACTTAAGGTGGGTATGGGTTCGGCAGCTGCTGCTGCAGTGTTTGAAGAACATCGGATATCAGCAGCAGACTTTACGAGTTCTGCACCATCAATAATTAAAAATCAAAATCTTGTTATCAAATTTAAGGAGACATACTTAACGTGGGAAAAGGCTGCTCCTCTTGTGCTTGGAATGGCTGTATTTGGTCTAGATTTACCTGTTGAGCCCAAAGATACAATTCCTTTGGAACAGGATTATGCATTGAAGTCTAAGGAGGATGATCCTGGATCATCTTCGTCTGGACGCAGATGGAGACTCTGGCCTATTCCTTTCCGTAAGGTCAAGACAATTGAGCACACGAATAGCAACTCATCAAATGAGGATGTTTTTCTAGATTCTGAGTCTGGATCTCTTGTAGAGCCAACTCCAACATCCAGTACCCAGGGATCTCCTCGTAAGCAACTTTTAAGGACAAATGTTCCCACTAATGAACAGATAGAGTCCTTGAATCTTAAAGATGGTCAGAATTTGGTAACCTTCAGTTTCTCTACAAGGGTTCTTGGAACACAACGGGTTGATGCTCATATATACTTATGGAAGTGGAATGCAAGGATCGTAATTTCAGACGTTGATGGAACTATTACAAAGTCTGATGTTTTGGGGCAGTTCATGCCTTTAGTTGGCAAAGACTGGACACAATCTGGAGTGGCAAGGCTTTTCTCAGCCATTAAGGAAAATGGATACCAGCTACTGTTTCTGAGTGCCCGTGCAATTGTCCAAGCATATTTAACCAGAAACTTCTTACTTAACATAAAACAGGATGGAAAAACCTTACCAAATGGCCCTGTTGTTATTTCACCTGATGGATTATTCCCTTCACTTTACCGAGAAGGCTATAAGAAGGCATCTTCTTACCAACATTATGAAATACAAATTCTAAAAATAATGTTTTTGCAGGATATCAAAAGACTTTTCCCTTCTGATTACAATCCATTCTATGCGGGATTTGGCAATAGAGATACGGATGAACTTAGTTACAGGAAGATTGGAATCCCAAAAGGCAAAATATTTATCATTAACCCCAAGGGTGAGGTGGCTATTAGTCAACGTATTGGTGCGAAGACATATACATCATTACATACCCTCGTCAATGACATGTTTCCACCTACTTCTTTGGTAGAGCAGGAGGACTTCAACTCATGGAATTATTGGAAAATGCCAATGCCAGATATTGAATGA 2697 0.4101 MNVVGKVGSLITQGVYSVATPFHPFGGAVDVIVVQQQDGTFRSTPWYVRFGKFQGVLKGAEKVVRINVNGVEANFHMYLDNSGEAYFVKEVDEEDKGVESNGVVQDSSDKNNSYLSSGHRLDHSISDSGVLQLKDEGDSSAVPRIQRTESDGRYYEFQDDRSSFEDSVDLSEYGSNSYESLEGENFVDSQGSHPEMVLVSVDGHILTAPISESEQNEEDVELRNPQFHLGPGEETDLCEGNEDFSSGENAWAADYISQLDAPIADVQPRHCDTNGNDNTSRLPVEVFQGEEVNICRAQETLEVKSQEDPHINTDSEGVVSGIKKENVFKSCLELQELAQQAGNAYSRDVGSSAEVQNSVEESNATCPVVDENEQDSVVPSKNIDELSPSNGSTSSNGLRSPKSESVLQEVEKNASGEVETASGSHSVTIHTEWRDEQVGKSVSNGRVDESQQTTALEDISTTSNVVEPQTETSSKGDQSHSGLGFEISLCGHELKVGMGSAAAAAVFEEHRISAADFTSSAPSIIKNQNLVIKFKETYLTWEKAAPLVLGMAVFGLDLPVEPKDTIPLEQDYALKSKEDDPGSSSSGRRWRLWPIPFRKVKTIEHTNSNSSNEDVFLDSESGSLVEPTPTSSTQGSPRKQLLRTNVPTNEQIESLNLKDGQNLVTFSFSTRVLGTQRVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRNFLLNIKQDGKTLPNGPVVISPDGLFPSLYREGYKKASSYQHYEIQILKIMFLQDIKRLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISQRIGAKTYTSLHTLVNDMFPPTSLVEQEDFNSWNYWKMPMPDIE. 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05464 898 Pfam lipin, N-terminal conserved region 1 100 IPR007651 -
Seca8g05464 898 MobiDBLite consensus disorder prediction 371 481 - -
Seca8g05464 898 MobiDBLite consensus disorder prediction 149 167 - -
Seca8g05464 898 PANTHER LIPIN 1 898 IPR026058 -
Seca8g05464 898 SMART lns2 691 854 IPR031315 -
Seca8g05464 898 MobiDBLite consensus disorder prediction 609 641 - -
Seca8g05464 898 Pfam LNS2 (Lipin/Ned1/Smp2) 645 874 IPR013209 -
Seca8g05464 898 MobiDBLite consensus disorder prediction 443 481 - -
Seca8g05464 898 MobiDBLite consensus disorder prediction 371 428 - -
Seca8g05464 898 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 485 593 IPR031703 -
Seca8g05464 898 MobiDBLite consensus disorder prediction 97 168 - -
Seca8g05464 898 SUPERFAMILY HAD-like 683 840 IPR036412 -
Seca8g05464 898 MobiDBLite consensus disorder prediction 101 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05464 Seca-Chr8 145752169 145758908 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05464 K15728 - gmx:100795884 1436.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05464 8 145752169 145758908 Seca8g05464 8 145752169 145758908 ECH
Seca8g05464 8 145752169 145758908 Seca8g05464 8 145752169 145758908 PCT