Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05463 ATGGGCAAAACGGCATTCACCACCGTCGTTCTCTTCCTCTTATTCCTCGTTTGCCCCTCCACGGCGGAGATCAAGTCCCTCACCATAACCTCCGACACCCGACCCATGATCCTGTTGGAGAAATTCGGGTTCACCCACACCGGCCACGTCACGATCGCCGTATCGGAGGTTTCGGTCGTGGCTGCCGCGACGCAACCGGACCCGTCGCGACTAGGGTTCTTCCTGCTAAACGAAGAATCGCTGCTGCAAGTCCTGATAGAGATCCAGCAAAACCCTAACTTCTGCGTGCTTGATTCTCGTTACACCACGCACCTCTTCACGTTCCGCGACCTCTCTCCCCCTCCAACGGCGTCGTTTAACCGCTCCTACCCTGTTACCTCTCCCAATGAGTTCAGTCTCTTCTTCGCCAACTGCGCCCCCGAGAGCTCCGTCTCCATGGCCGTTCACACCGAGCTCTTCAACCTCGACGCCGATGGCTCCCGTGACTACCTCTCCGCCGGCCAGACTCAGCTCCCTTCTCTCTACTTCCTGTTCTCCCTCGCCTACTTCGCCTTCCTCACCATCTGGCTCTACATCTGCCACACCAACAGACTCTCCCTTCACCGGATCCACCTCCTCATGGCCTCTCTCCTTCTCATGAAGGCTCTTAACCTCATCTGCGCCGCCGAGGATAAGCACTATGTTAAGGTCACCGGCACCCCTCACGGCTGGGATATTCTCTTCTACATCTTCCAGTTCATTCGTGTTGTCCTGCTCTTCACTGTCATCGTCTTGATCGGCACAGGATGGTCCTTCCTTAAGCCATTCTTGCAGGAGAGGGAGAAGAAGGTCCTCATGGTTGTGATCCCTCTTCAGGTTCTGGCTAATCTTGCATCTGTCATTATCGGTGAGACTGGGCCTTTCATCAAAGATTGGGTTACTTGGAATCAGGTTTTCTTGCTCGTGGATATCATTTGTTGCTGTGCTATTATTTTCCCAATTGTATGGTCTATTAGATCGCTCAGAGAAACCTCCAAGACTGATGGCAAGGCTGCTAGGAACTTGGCAAAGTTGACCCTTTTCAGGCAGTTCTATATTGTTGTCATTGGTTACTTGTACTTCACGCGCATTGTAGTCTTTGCTCTCAAAACCATTGCAGCCTATAAGTACCAGTGGGTCAGTAATCTAGCCGAGGAAACTGCTAGTCTTGCATTTTACGTTGTGATGTTCTACATGTTTAGGCCTGTTGAGAGGAACGAGTATTTTGTGCTTGATGAGGAGGAAGAAGAGGCAGCAGAGATTGCTCTCAAGGAAGAAGAATTTGAGCTTTGA 1311 0.5156 MGKTAFTTVVLFLLFLVCPSTAEIKSLTITSDTRPMILLEKFGFTHTGHVTIAVSEVSVVAAATQPDPSRLGFFLLNEESLLQVLIEIQQNPNFCVLDSRYTTHLFTFRDLSPPPTASFNRSYPVTSPNEFSLFFANCAPESSVSMAVHTELFNLDADGSRDYLSAGQTQLPSLYFLFSLAYFAFLTIWLYICHTNRLSLHRIHLLMASLLLMKALNLICAAEDKHYVKVTGTPHGWDILFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQEREKKVLMVVIPLQVLANLASVIIGETGPFIKDWVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGYLYFTRIVVFALKTIAAYKYQWVSNLAEETASLAFYVVMFYMFRPVERNEYFVLDEEEEEAAEIALKEEEFEL. 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05463 436 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 11 426 IPR009637 GO:0016020
Seca8g05463 436 Pfam Lung seven transmembrane receptor 131 412 IPR009637 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05463 Seca-Chr8 145729953 145731263 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05463 K22985 - gmx:100815429 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05463 8 145729953 145731263 Seca8g05463 8 145729953 145731263 ECH
Seca8g05463 8 145729953 145731263 Seca2g04552 2 131616697 131618028 PCT