Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05376 ATGGAGACACACACTGAGATGAGGGTTTCAAAGTTCAAGAGGGTTTGTGTGTTCTGTGGGAGTAGCCCTGGCAAGAAGAGAAGCTACCAAGATGCTGCCATTGAGCTTGGCAATGAATTGGTCTCAAGGAACATTGATCTGGTCTATGGAGGAGGAAGCATTGGTCTAATGGGATTGGTTTCTCAAGCTGTTCATGATGGCGGTCGGCATGTCATTGGAGTTATTCCCAAGACGCTCATGCCTCGAGAGCTAACTGGTGAAACAGTGGGAGAAGTAAAGGCTGTAGCAGATATGCACCAAAGGAAGGCAGAGATGGCTAAGCATTCAGATGCCTTTATTGCCTTACCAGGCGGTTATGGGACTCTAGAGGAGCTTCTTGAAGTCATAACCTGGGCTCAACTTGGGATTCATGACAAACCGGTGGGATTAGTAAATGTTGATGGATACTTCAATTCGTTGCTGTCATTTATTGACAAAGCTGTGGAAGAGGGATTTATTAGTCCAAATGCCCGCCACATAATTGTATCAGCTCCAACATCAAAAGAGTTAGTGAAGAAATTGGAGGACTATGTTCCCTGTCACGAAAGTGTTGCTTCCAAGTTGAGCTGGCAGATGGAACAACAACTCACTTATCCTGAAGAGTATGACATCTCAAGGTAG 660 0.453 METHTEMRVSKFKRVCVFCGSSPGKKRSYQDAAIELGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISPNARHIIVSAPTSKELVKKLEDYVPCHESVASKLSWQMEQQLTYPEEYDISR. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05376 219 FunFam CASP-like protein 3 189 - -
Seca8g05376 219 Gene3D - 3 189 - -
Seca8g05376 219 NCBIfam Rossman fold protein, TIGR00730 family 13 190 IPR005269 GO:0009691|GO:0016787
Seca8g05376 219 PANTHER LOG FAMILY PROTEIN YJL055W 1 214 - -
Seca8g05376 219 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Seca8g05376 219 SUPERFAMILY MCP/YpsA-like 11 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05376 Seca-Chr8 144714730 144719061 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05376 K22522 - gmx:100791145 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05376 8 144714730 144719061 Seca8g05376 8 144714730 144719061 ECH