Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05363 ATGAAATCAAGATTTTTGAGAGGGTGTCTTAACAAGTGCAAGAAAATGGGGAGTAGAGTTAAAACTTGTGCTGCTTGTGAGTACTGTTGTCAATGGGTTTTGTGGTCTTCCTTTCATGAGAGTTGCTCCATTCCAAGTGATGTTCCAAAAGGTCACATGGTTGTCTATGTTGGAGAGAATCACAAGAGATATGTGATCAAGATTGCATTGCTTCAAGATCCACTCTTCAGGGCCCTTCTGGATCAAGCTCAAGAAGAGTATGATTTCATTGCAGATTCAAGACTCTGCATTCCTTGCGATGAGAATCTTTTCCTCAATGTCCTTCGCTGCGCAACCTCCTCACAGAACCAACGGGCATGTCTGTGTCTTTAA 372 0.4247 MKSRFLRGCLNKCKKMGSRVKTCAACEYCCQWVLWSSFHESCSIPSDVPKGHMVVYVGENHKRYVIKIALLQDPLFRALLDQAQEEYDFIADSRLCIPCDENLFLNVLRCATSSQNQRACLCL. 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05363 123 Pfam Auxin responsive protein 37 110 IPR003676 GO:0009733
Seca8g05363 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 25 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05363 Seca-Chr8 144453293 144453664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05363 10 119 Calmodulin-binding Proteins AT4G34750 40.870 1.22e-22 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05363 K14488 - gmx:102662255 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05363 8 144453293 144453664 Seca8g05363 8 144453293 144453664 ECH