Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05299 ATGAAGCACCAAAGGACGCTCACAGTGTTCTTACCAAATTTGCTAATACTAGCAATCATCATATTCCATCCAACAATATGGACTGTAGCGCAGGAAGTTGAGGATGAGAGTGAGTTTGATTACATAAAAGGGAGCGAAAAGGGTCCATCACACTGGGGCGAACTGAAGAAGGAATGGGCAACATGTAAAAATGGCGCAATGCAATCTCCCATTGATCTGTCAAGCCATAGAGTAAAGGTAGTACGAAAATTAGGAGAGCTAAAGAAGTTTTATAAGCCCCAGAATGCCACTGTCAAGAACAGAGGCCATGATATTGAGCTGAAATGGGAGGGAGATGCAGGATCAATAAACATCAATGGCACTGAGTTTTCTCTGCATCAATGCCACTGGCATTCACCTTCTGAGCACACCATCAATGGAAGGAGGTATGACCTGGAGCTCCACATGGTTCATGAAAGCCCAAAGATAAAAGGGAAGAGCAAGATCGCTGTTGTTGGACTTCTATATAAGATTGGTCGTCGCCCCGATCCTGTTCTCAGCAAGTTGTCAAAACACATAAAATCGATGGTGGATGAAGAAGCAGAAAGGAGCATTGGGGTGATTGATCCCTCAGAAATCAAGCTGGGTGGAAAGAAGTACTATAGATACATGGGCTCCCTTACTGTCCCTCCTTGCACTGAAGGTATAAGAAGTGTGTCAAAGGCGCAAATCAAGTTACTACAAGAGGCTGTCCACGATATGAAGTTAAATAAATGTAACTGTATATGTATATATGCAGAGGACGAGAGAGAGTTTGACTATATTGAAGGAAGTGAAAAGGGGCCTCATCATTGGGGTGAACTAAAAGAAGAGTGGGCAGCTTGTAAACATGGAGACATGCAATCTCCCATAGACTTGTCCAGTGGGAGAGTCAAAATGATCCCAAATTCTCGCCAACTAAAGACCAATTACAAATCTTCTAATGCTACTATTCTTAACAGAGGCCATGATATTGCGGTATTTTGGAGGGGCAATGCTGGCTCAATACACATCAATGGAACCGAATTCTTTCTGCAACAATGTCACTGGCACTCTCCTTCTGAACATTCCATCAATGGCAGGAAGTATGACTTAGAGATGCACATGGTGCATGTTAGACCAGACCCCAGGGGAAACAAGATTGTTGTGGTTGGTGCTCTGTATAAGATTGGTCACCCTGATCCTTTTCTCTCTCAGTTGGAGGAAGACATAAGTCACATGATAGATGAAGAAGAAGAAAGAGCAATTGGAGATATAGATCCCTCCCAAATCCAGACAAGAGGCAAGATTTATTATAGATACATAAGGACAGTTTCAGAAGCACAAGTGCATCTTTTGAGGGAGGCAGTGCATGACCACGCAGAGATGAATGCAAGGCCAAGGCAGCCACATAACAATAGAGACATACATCTACACCTAAACCTCCAATTCAAACAAAGGAGCAAACCATAG 1470 0.4313 MKHQRTLTVFLPNLLILAIIIFHPTIWTVAQEVEDESEFDYIKGSEKGPSHWGELKKEWATCKNGAMQSPIDLSSHRVKVVRKLGELKKFYKPQNATVKNRGHDIELKWEGDAGSININGTEFSLHQCHWHSPSEHTINGRRYDLELHMVHESPKIKGKSKIAVVGLLYKIGRRPDPVLSKLSKHIKSMVDEEAERSIGVIDPSEIKLGGKKYYRYMGSLTVPPCTEGIRSVSKAQIKLLQEAVHDMKLNKCNCICIYAEDEREFDYIEGSEKGPHHWGELKEEWAACKHGDMQSPIDLSSGRVKMIPNSRQLKTNYKSSNATILNRGHDIAVFWRGNAGSIHINGTEFFLQQCHWHSPSEHSINGRKYDLEMHMVHVRPDPRGNKIVVVGALYKIGHPDPFLSQLEEDISHMIDEEEERAIGDIDPSQIQTRGKIYYRYIRTVSEAQVHLLREAVHDHAEMNARPRQPHNNRDIHLHLNLQFKQRSKP. 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05299 489 ProSiteProfiles Alpha-carbonic anhydrases profile. 37 317 IPR001148 -
Seca8g05299 489 ProSitePatterns Alpha-carbonic anhydrases signature. 360 376 IPR018338 GO:0004089|GO:0008270
Seca8g05299 489 SUPERFAMILY Carbonic anhydrase 38 244 IPR036398 -
Seca8g05299 489 PANTHER CARBONIC ANHYDRASE 36 250 IPR023561 GO:0004089|GO:0008270
Seca8g05299 489 ProSitePatterns Alpha-carbonic anhydrases signature. 134 150 IPR018338 GO:0004089|GO:0008270
Seca8g05299 489 SMART Carb_anhydrase_2a 267 476 IPR001148 -
Seca8g05299 489 SMART Carb_anhydrase_2a 41 254 IPR001148 -
Seca8g05299 489 SUPERFAMILY Carbonic anhydrase 264 475 IPR036398 -
Seca8g05299 489 CDD alpha_CA_prokaryotic_like 48 247 IPR041891 -
Seca8g05299 489 Gene3D Alpha carbonic anhydrase 35 254 IPR036398 -
Seca8g05299 489 Gene3D Alpha carbonic anhydrase 261 484 IPR036398 -
Seca8g05299 489 ProSiteProfiles Alpha-carbonic anhydrases profile. 323 479 IPR001148 -
Seca8g05299 489 CDD alpha_CA_prokaryotic_like 274 477 IPR041891 -
Seca8g05299 489 Pfam Eukaryotic-type carbonic anhydrase 48 242 IPR001148 -
Seca8g05299 489 Pfam Eukaryotic-type carbonic anhydrase 274 440 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05299 Seca-Chr8 143582415 143594800 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05299 K01674 - gmx:100797935 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05299 8 143582415 143594800 Seca8g05299 8 143582415 143594800 PCT
Seca2g04697 2 133131603 133134103 Seca8g05299 8 143582415 143594800 PCT