Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05253 ATGGAAGGCACATCACTGAAAGCAGAGAACCTAAAGCCTGTTATCCTCAAAGCTGGTGTTCCCTTAGCTGTATCTCTGGCTGGTGCGATCTATGCATGGATCATGGCAAAGAAAAGTTTATCTAAAGTCTCAGATAATGAGTCTGATTCCCCTGAAAGCAATTCTCATCAGGGAAATAAACATGAAGAAAGTTTTCACAACCTTTCTTCTATGGAAGATGAAGAACCTGCTAACCCCATGGATAGCAGTGTTCTTTCTAGGAGCTTGGTAATCCATGACAATCACACATGTCTGGAACAAGAGATCACTGGCCTAAGAAGCCAAATTGAAGGTCTTCAAATGAGAGAATTGGCCTTGAGTTTACAGTTTGACCAGTATTGTGAAATGAAGGAACAAGAATCTATACTTATGGAAATCAAAAACATGTTATCATTGGAGACTGCTCATGTTGAATTCTTGGATAGAGAGATTTCTTACATAGAGACAGAAACTATGAGGTTGGAGACTTTTGTAGTCCAATATTTGAGGATTATTGAACAGCTTGAGTATTGGAAATCAGAGAATAGGATGCTTCAAAGGAAGGTTCAGAAGCTACTTAGGAAATTAAAGGCTCAATCCCACTTGATAAAGGAGCAAACTTTGAAGATCAAAGAGAAAGAAGCAGAAATCTTGAGAAACCATGATGCCTTGCAAACAAGGGTTAGTGTCATCAACAAGTTAGAGGATGAAATCAGAGAGCTACAAAGGGTTTTGGATCAATTGCAGGATGAGAAGAATGAACTTCTGAAGAAGCTTGACACAGTAGAAGCAGATGCAACTAAGGAACAGATGCATAGAAAACCACTGAAATATTATTTGCAGGTTGATTCAGGAGATGTAAGCAAGGAAGATTACAACCAGCTCCTCAATGAATTGGAACAGGTCAAGAAGGAACGTGCAGCTGAAGTTGAAGATCTGAATCACTTGAGGAGGACCAATGCTTACTTAAAGCAAGAGTTAATGAAACAACAACAACAACAGCAGCAGGATCAGGATAGAGACCACATAGACTTGGAATTTGAAGGAGGAAGAGGAAGAGTTATGCAATATGACTCAGATCATGAGTTACATTATTCCTTTTTGGAGCATCACAATGTGTCTTGCATTGGTTCTGCTCATGGTGCTAATCCTTGTTCCACAAGGAAAAGATTGCTTAAAAGGCTGAAGAGGTGGGTGGAAGGCAGTGAAAAGAAAAATGGTCATGAAATTAAGTGCCTTGGTGGCCATTCTGTTTCCTATGGATCAAAGAAATCTGTAATTCCTGCTACAGCAAGGTTTTGTCCTAGTGTTTGA 1332 0.3956 MEGTSLKAENLKPVILKAGVPLAVSLAGAIYAWIMAKKSLSKVSDNESDSPESNSHQGNKHEESFHNLSSMEDEEPANPMDSSVLSRSLVIHDNHTCLEQEITGLRSQIEGLQMRELALSLQFDQYCEMKEQESILMEIKNMLSLETAHVEFLDREISYIETETMRLETFVVQYLRIIEQLEYWKSENRMLQRKVQKLLRKLKAQSHLIKEQTLKIKEKEAEILRNHDALQTRVSVINKLEDEIRELQRVLDQLQDEKNELLKKLDTVEADATKEQMHRKPLKYYLQVDSGDVSKEDYNQLLNELEQVKKERAAEVEDLNHLRRTNAYLKQELMKQQQQQQQDQDRDHIDLEFEGGRGRVMQYDSDHELHYSFLEHHNVSCIGSAHGANPCSTRKRLLKRLKRWVEGSEKKNGHEIKCLGGHSVSYGSKKSVIPATARFCPSV. 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05253 443 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 12 339 IPR040265 -
Seca8g05253 443 Coils Coil 95 115 - -
Seca8g05253 443 Coils Coil 237 271 - -
Seca8g05253 443 Coils Coil 291 339 - -
Seca8g05253 443 Coils Coil 181 222 - -
Seca8g05253 443 MobiDBLite consensus disorder prediction 54 70 - -
Seca8g05253 443 MobiDBLite consensus disorder prediction 43 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05253 Seca-Chr8 143045409 143046761 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05253 - - gmx:100776941 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05253 8 143045409 143046761 Seca8g05253 8 143045409 143046761 ECH
Seca8g05253 8 143045409 143046761 Seca2g04736 2 133610880 133613555 PCT