Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05239 ATGCCTTCCGGTCACTTGCTTCTCGAGGAACCCATTAGGATGGCCTCCATCCTAGAGCCATCGAAAGCTAACTTTTTTCCTGCAATGACAAAGATCGTTGGTACCCTGGGTCCTAAATCTCGATCTGTTGAGGCTATTTCTGGATGTCTCAAAGCTGGCATGTCTGTGGCTCGTTTTGACTTTTCCTGGTGTGACCCCGAGTATCACCAGGAGACTTTGGAGAATTTGAAGACTGCTATCAAGAGTACTAAGAAGCTTTGTGCTGTTATGCTGGACACAGTGGGCGCAGAGATGCAGGTTGTTAACAAAAGTGAGGCATCGATCTCGCTTCAGGAAAATGCTCAGGTTGTTCTGACTCCTAACCAGGGACAAGAAGCTACTTCAGAGATATTGCCTATCAATTTTGATGGTCTGGCCAAGGCAGTAAAGAAGGGAGACACTATTTTTATTGGTCAATACTTGTTCACCGGAAGTGAAACTACTTCTGTATGGCTAGAGGTATCTGAAGTCAAAGGGCAAGACGTTGTTTGTATTATAAAGAATTCGGCTACATTGGCTGGGTCATTGTTCACTTTGCATGCCTCTCAAATTCATATTGATTTGCCTACCCTCACTGAGAAAGACAAGGAGGTTATAAGCACCTGGGGAGTTAAAAACAAAATTGATTTTCTGTCATTGTCATATACTAGGCATGCTGAAGATGTTCGCCAGGCTCGTGAATTCCTTTCAAAGTTAGGTGATCTTAGCCAGACTCAAATTTTTGCAAAGATTGAAAATGTAGAGGGATTGACCCATTTTGATGAGATTTTACAAGAAGCTGATGGCATTATCCTTTCCCGAGGGAATTTGGGCATTGATCTTCCACCAGAAAAGGTTTTCTTATTTCAAAAATCTGCCCTTTACAAATGTAATATGGCTGGGAAACCTGCTGTGCTTACTCGTGTTGTGGATAGCATGACTGCCAACTTAAGACCAACTCGTGCAGAAGCCACTGATGTCGCCAATGCAGTTTTAGATGGAAGTGATGCAATACTTTTGGGTGCTGAGACTTTACGTGGGTTGTACCCTGTTGAGACTATTTCTACTGTTGGCAAAATTTGTGCAGAGGCTGAAAAAGTTTTCAATCAAGACCTTTATTTTAAGAAGACAGTCAAGTATGTTGGAGAACCCATGACCCACTTGGAATCAATTGCGTCCTCTGCGGTACGAGCTGCTATTAAGGTGAAGGCTTCTGTTATAATTTGCTTCACTTCATCTGGAAGGGCTGCAAGGTTGATAGCAAAGTATAGGCCAACAATGCCTGTTCTCTCTGTTGTGATCCCCAGACTTAAGACAAATCAGCTGAAGTGGAGCTTTACTGGAGCCTTTGAGGTTGGATCTTAA 1383 0.4302 MPSGHLLLEEPIRMASILEPSKANFFPAMTKIVGTLGPKSRSVEAISGCLKAGMSVARFDFSWCDPEYHQETLENLKTAIKSTKKLCAVMLDTVGAEMQVVNKSEASISLQENAQVVLTPNQGQEATSEILPINFDGLAKAVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGQDVVCIIKNSATLAGSLFTLHASQIHIDLPTLTEKDKEVISTWGVKNKIDFLSLSYTRHAEDVRQAREFLSKLGDLSQTQIFAKIENVEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSALYKCNMAGKPAVLTRVVDSMTANLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGKICAEAEKVFNQDLYFKKTVKYVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFTGAFEVGS. 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05239 460 FunFam Pyruvate kinase 96 202 - -
Seca8g05239 460 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 6 375 IPR015813 GO:0003824
Seca8g05239 460 SUPERFAMILY PK C-terminal domain-like 358 442 IPR036918 -
Seca8g05239 460 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g05239 460 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g05239 460 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g05239 460 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g05239 460 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g05239 460 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g05239 460 Gene3D - 96 202 IPR015806 GO:0004743|GO:0006096
Seca8g05239 460 Gene3D - 30 370 IPR040442 -
Seca8g05239 460 Pfam Pyruvate kinase, alpha/beta domain 395 457 IPR015795 -
Seca8g05239 460 Pfam Pyruvate kinase, barrel domain 30 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g05239 460 SUPERFAMILY PK beta-barrel domain-like 103 186 IPR011037 -
Seca8g05239 460 Gene3D - 371 440 IPR036918 -
Seca8g05239 460 PANTHER PYRUVATE KINASE 26 439 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g05239 460 NCBIfam pyruvate kinase 30 440 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05239 Seca-Chr8 142868402 142874968 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05239 K00873 - gmx:100802271 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05239 8 142868402 142874968 Seca8g05239 8 142868402 142874968 ECH