Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05190 ATGATGATGGCAAAATGTAACAAGTCTCATGTTGTGATTCCTCTCCTCCTAATTCACATTCTATGCTTCCTGTTGTTCCCACAGACCCTACAATCACAGGGGAATGCTTTTTCTCGTCAACCTTCTGGAAAGTTCATCCACACTCCCCAACAGCGCTCAGATTCTGACCCTGAACAGGTGCACATTTCATTGGTGGGTGAAGATCATATAAGAGTGTCGTGGATAACAGAAGACAAGCACACAGAATCTGTGGTGGAATATGGAACGAAGAAAGGGGAATATAGCACAAAAGCAAAGGGGGAGCACACATCATACTATTATTTCTTATACAAATCCGGGAAGATCCATCATGTGGTAATTGGGCCTTTACAACCAAACACCACTTACTTCTACAGATGCGGAGGATCGGGCCCTGAATTTTCCTTCAAGACACCTCCATCGAAGTTGCCTATTGAATTTGTGGTGGTCGGGGACTTGGGGCAAACTGAATGGACAGAATCAACCTTGAAACACATTGATAGCAAAGACTATGACGTGTTTTTGTTACCGGGAGATCTATCCTATGCTGATACCCAACAACCACTTTGGGACTCATTCGGCCGTTTTGTGGAGCCATATGCTAGTCGCAGGCCATGGATGGTTACAGAAGGCAACCACGAGATTGAGACCATCCCCATTATTCACCCACATGCTTTTAAGGCCTACAATGCTCGTTGGCCCATGCCCTATAAGGAAAGTGGCTCCACCTCAAATCTCTACTACTCATTTGAAGTTGCAAGCACCCACATCATCATGTTGGGATCTTACACAGATTTTGACGAACACTCCCACCAATATAAATGGCTCCAATCTGATCTAGCCAAGATTAATAGGAAGAGGACACCCTGGGTGATTGCCTTGTTGCATGCACCTTGGTATAATACTAACGAGGCACATCAAGGTGAAGGTGAAAGCATGAGACAAGCCATGGAAGAATTGCTCTACAAGGCTCGTGTTGACTTGGTTTTTGCTGGACACGTCCATGCATATGAGCGCTTTGTATGTCATAATCATATTAATATTACTATGCCACTTTTCTTATGTATGTTCGTTTATATGATTTTTTCTCTAATTATTTGA 1119 0.4352 MMMAKCNKSHVVIPLLLIHILCFLLFPQTLQSQGNAFSRQPSGKFIHTPQQRSDSDPEQVHISLVGEDHIRVSWITEDKHTESVVEYGTKKGEYSTKAKGEHTSYYYFLYKSGKIHHVVIGPLQPNTTYFYRCGGSGPEFSFKTPPSKLPIEFVVVGDLGQTEWTESTLKHIDSKDYDVFLLPGDLSYADTQQPLWDSFGRFVEPYASRRPWMVTEGNHEIETIPIIHPHAFKAYNARWPMPYKESGSTSNLYYSFEVASTHIIMLGSYTDFDEHSHQYKWLQSDLAKINRKRTPWVIALLHAPWYNTNEAHQGEGESMRQAMEELLYKARVDLVFAGHVHAYERFVCHNHINITMPLFLCMFVYMIFSLII. 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05190 372 Gene3D - 56 147 - -
Seca8g05190 372 Pfam Calcineurin-like phosphoesterase 153 343 IPR004843 GO:0016787
Seca8g05190 372 PANTHER ACID PHOSPHATASE RELATED 16 346 IPR039331 GO:0003993
Seca8g05190 372 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 56 148 - -
Seca8g05190 372 CDD FN3 55 132 IPR003961 GO:0005515
Seca8g05190 372 SUPERFAMILY Metallo-dependent phosphatases 151 353 IPR029052 -
Seca8g05190 372 CDD MPP_PAPs 150 346 IPR041792 -
Seca8g05190 372 Pfam Purple acid Phosphatase, N-terminal domain 57 144 IPR015914 GO:0003993|GO:0046872
Seca8g05190 372 SUPERFAMILY Purple acid phosphatase, N-terminal domain 49 146 IPR008963 GO:0003993|GO:0046872
Seca8g05190 372 Gene3D - 148 361 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05190 Seca-Chr8 141948611 141951519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05190 57 348 Miscellaneous Gene Families AT2G03450 27.762 3.48e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05190 K22390 - gmx:100782755 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05190 8 141948611 141951519 Seca8g05190 8 141948611 141951519 ECH