Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05185 ATGGCAAAGCTTAAGGTGCCGTCAGATCCTCTAATTGTTGGGAGAGTGATAGGAGATGTTCTTGATTCTTTCACACCGACCGTGAAAATGACTGTAACCTACAACCACAAGCAAGTCTTCAATGGCCATGAGTTCTTCCCTTCCAAACTCACCACTAGGCCCAGGGTTCAGATTGATGGAGGTGACATGAGGTCCCTCTTTACACTGATCATGACCGACCCGGATGTTCCTGGCCCTAGTGATCCTTACTTGAGAGAGCACTTGCACTGGATAGTGACAGACATTCCAGGAACAACAGATGCCACATTTGGTAGGTTTCATTTTAATTTATTGAACTAG 339 0.4572 MAKLKVPSDPLIVGRVIGDVLDSFTPTVKMTVTYNHKQVFNGHEFFPSKLTTRPRVQIDGGDMRSLFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRFHFNLLN. 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05185 112 SUPERFAMILY PEBP-like 15 105 IPR036610 -
Seca8g05185 112 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 67 89 IPR001858 -
Seca8g05185 112 Gene3D - 3 110 IPR036610 -
Seca8g05185 112 Pfam Phosphatidylethanolamine-binding protein 51 100 IPR008914 -
Seca8g05185 112 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 14 101 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05185 Seca-Chr8 141882921 141884300 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05185 K06910 - qsu:112017308 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05185 8 141882921 141884300 Seca8g05185 8 141882921 141884300 ECH
Seca8g05185 8 141882921 141884300 Seca2g04810 2 134629027 134630995 PCT