Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05181 ATGGAGCACCTTCCTGTTGAAGTGATTGGTAATATACTATCCCATCTTGGGTCTGCACGTGATGTTGTGACTGCTTCAGCAACTTGCAAGAAATGGAGAGAAGCTTGGCGCTGCCACCTCCACACTCTTTCATTCAATTCTTGTGACTGGCCCCTTTATCATGAATTAACCCCTAATAGGTTGGAAATACTCATCACTCAAACAATATTTCAAACCAAGGCACTCCAGTGCTTAACAATTTTCATGGATGATGTCCATGAGTTTTCTGCTGCCCCTGTCATTGCCTGGCTTATGTATACCAGGGATTCCTTGCGCCAGTTGCATTATAACGTGAGGACAACCCCAAATTTCAATATCATTGAGAAATGTGGCAGGCAGAAGTTGGAAGTGTTGACATTGGCTCGCAATTCTATCGCCGGTGTGGAGCCTAGTTATCAGAAGTTTCCTTGCTTGAAGTCACTTTCATTGAGTTTTGTTAGCATCTCAGCACTGGATCTGAGCCTTTTACTTTCTGCTTGTCCAAGGCTTGAAACCTTGTCTATGGTCAGCCCAGAAATTGCTGTGTCAGATTCGCAGGCTTCCATGGAGCTTAGCAGCTCTTCTTTGAAGGATTTCTCTGTTGAGTCATTTGGTTTAGACAAATTTATATTGGAGGCAGATCTGCTTGAGAATTTACATCTTAAAGATTGTACCTTTGAGGTTTTTGAATTGATTGGTAAGGGGACATTGAAAGTGTTGAAGGTTGATGATGTGAGTGTCATCCATCTTGATATTGGTGAGAATACAGAGAACCTTGAGATTGTAGATGTCAGTAACTTCACAATTATGTGGCCAAAATTTTATCATATGATCTCAAAAGCATCAAAGTTACGTAGGCTTCGATTGTGGGGTGTTGTTTTTGATGATGAGGATGAAGTTGTGGACTTAGAGACGATTTCTGTTTGTTTTCCTCAATTGATCCACCTGTCCTTAAGTTATGATTTGAGAGATGGTGTACTTAATTATGGCTTGCAGGGTTTGTCTCTTCTGGTGAATGTGGTTGTGTTAGAACTTGGATGGACATCAATCACTGATCTTTTCTCAGTATGGGTAGCTGGACTTTTGGAAAGATGTCCCAATTTGAAAAAATTGGTCATTTATGGTTTTGTTTCAGAGGTCAAAACACATGAAGAGTGCCAAATTTTTGCCAAATTTACTGAATTCATTCTTCAACTTGGAAGGAAATATATGCATGTAAAAGTAGAGTTTGAATATGAGTAG 1260 0.4008 MEHLPVEVIGNILSHLGSARDVVTASATCKKWREAWRCHLHTLSFNSCDWPLYHELTPNRLEILITQTIFQTKALQCLTIFMDDVHEFSAAPVIAWLMYTRDSLRQLHYNVRTTPNFNIIEKCGRQKLEVLTLARNSIAGVEPSYQKFPCLKSLSLSFVSISALDLSLLLSACPRLETLSMVSPEIAVSDSQASMELSSSSLKDFSVESFGLDKFILEADLLENLHLKDCTFEVFELIGKGTLKVLKVDDVSVIHLDIGENTENLEIVDVSNFTIMWPKFYHMISKASKLRRLRLWGVVFDDEDEVVDLETISVCFPQLIHLSLSYDLRDGVLNYGLQGLSLLVNVVVLELGWTSITDLFSVWVAGLLERCPNLKKLVIYGFVSEVKTHEECQIFAKFTEFILQLGRKYMHVKVEFEYE. 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05181 419 Gene3D - 2 40 - -
Seca8g05181 419 PANTHER F-BOX PROTEIN-LIKE 2 381 - -
Seca8g05181 419 Gene3D Ribonuclease Inhibitor 100 196 IPR032675 -
Seca8g05181 419 Gene3D Ribonuclease Inhibitor 197 403 IPR032675 -
Seca8g05181 419 SUPERFAMILY F-box domain 2 53 IPR036047 GO:0005515
Seca8g05181 419 SUPERFAMILY RNI-like 113 381 - -
Seca8g05181 419 SMART fbox_2 4 43 IPR001810 GO:0005515
Seca8g05181 419 Pfam F-box-like 2 35 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05181 Seca-Chr8 141817833 141821584 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05181 - - gmx:100792331 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05181 8 141817833 141821584 Seca8g05181 8 141817833 141821584 ECH