Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05180 ATGGCTTCCAAGGCCATGGCGGTGGCAGCAGAGAAGATACGTACGGCGGCGCGGCGTCAAGCCGTTACCTTAACCGACGCCGCTGCCTCTCGAATACGCTTCTTACTGAAGCAGCGCCAGAGGCCGTTCTTGAAACTCGGCGTCAAGGCTCGCGGTTGTAACGGCTTATCTTACACTCTAAATTATGCAGCTATTGGTGCTTTGACAGATGAGAAAGGGAAATTTGATGAGTTAGTTGAGGATAAGGGCGTTAAGATATTGATTGATCCTAAGGCTCTTATGCATGTTATTGGAACGAAGATGGATTTCGTAGATGACAAACTCAGGTCTGAGTTCATTTTTGTCAATCCAAACTCTAAAGGTCAGTGTGGTTGTGGTGAATCTTTCATGACAACAGCTAGTTCTGGAGCTGCTAAGCAAGGAAATGGTTGA 432 0.4699 MASKAMAVAAEKIRTAARRQAVTLTDAAASRIRFLLKQRQRPFLKLGVKARGCNGLSYTLNYAAIGALTDEKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFIFVNPNSKGQCGCGESFMTTASSGAAKQGNG. 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05180 143 Pfam Iron-sulphur cluster biosynthesis 22 127 IPR000361 -
Seca8g05180 143 PANTHER IRON-SULFUR CLUSTER ASSEMBLY PROTEIN 14 131 - -
Seca8g05180 143 SUPERFAMILY HesB-like domain 21 120 IPR035903 -
Seca8g05180 143 ProSitePatterns Hypothetical hesB/yadR/yfhF family signature. 112 129 IPR017870 -
Seca8g05180 143 FunFam Iron-binding protein IscA 21 131 - -
Seca8g05180 143 NCBIfam iron-sulfur cluster assembly accessory protein 22 130 IPR016092 GO:0016226|GO:0051536
Seca8g05180 143 Gene3D - 21 133 IPR035903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05180 Seca-Chr8 141813371 141816008 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05180 K22063 - gmx:100777750 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05180 8 141813371 141816008 Seca8g05180 8 141813371 141816008 ECH