Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05178 ATGGCTCACCAATCCTCTGATGAACACAACCAGATTCCTCCTCAACCACTACCATTGGAGCTTATCAAGAAACCCCACTTACCCAAACACAACACTGAATCTGATGATGAGCAAGAACAACAAGAAAAAGATGAAGAAACCCCATCTGCTTCAAAAACAATAACCAACTTGGGAATTGCATTGGAAGAGGTGGTTGTGCCCCCTGCAGAAGAGGCAGAGGATAGTGGAAGAGAGAGATTGAAGAGGCATAGAATTGAAGTAGCAGGGAGGGTATGGATTCCTGAGATATGGGGACAAGAGGAGCTGTTGAAGGATTGGATAGATAGCAGAACATTTGATGCTCCTTTAGTTCCAAGCAGGATCATGACAGCAAGAGCAGCTTTGGCTAAAGAGGGTAGAAGAGCCAGTACTGGTGAATTAAGAATCCAATACAGGTGTTGA 441 0.4444 MAHQSSDEHNQIPPQPLPLELIKKPHLPKHNTESDDEQEQQEKDEETPSASKTITNLGIALEEVVVPPAEEAEDSGRERLKRHRIEVAGRVWIPEIWGQEELLKDWIDSRTFDAPLVPSRIMTARAALAKEGRRASTGELRIQYRC. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05178 146 CDD BIC1_CID 76 132 - -
Seca8g05178 146 PANTHER PROTEIN BIC1 27 146 IPR040374 GO:0009785
Seca8g05178 146 MobiDBLite consensus disorder prediction 23 37 - -
Seca8g05178 146 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05178 Seca-Chr8 141789664 141790104 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05178 - - pvu:PHAVU_007G227500g 143.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05178 8 141789664 141790104 Seca8g05178 8 141789664 141790104 ECH