Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05172 ATGGGGAATTGCTTAGTTCTGGAAGCAAACGTGGTAAGGATCATGAAAAGTGATGGAAAAGTTCTTGAATACAAAACACCCATCAAAGTCCATCAGATTCTCAATCAATTTTCAGGCCATGCAATCTCTGACTCTCTAAAACATCTTCACCCCAATTCCAGATTGCTCAACGGTCACTTATATTACCTAGTTCCTCTGCCACCACCGAAAGCTAATTCCAAGAAGAAGGTGAGGTTTGCTGAACCAGAAGTAGTAGAAGGAGCAAAGGAAAGTGGCGTGGTTAGGATTAAGCTGGTTATTAGTAAGCAAGAACTGCAGCATATGGTACTGCAAAAGGGTGGGATCTCTGTTAACGAGATGTTATCTCTAGCTCATGGTGACAGGGGATTAATAATGGATGGTGAAGAAGATGTGTGTAGAAAAAATGATGATGGTTCTCAAGTGTGGAAACCAGTGTTAGAGAGCATACCCGAAGTGAACTAG 483 0.4182 MGNCLVLEANVVRIMKSDGKVLEYKTPIKVHQILNQFSGHAISDSLKHLHPNSRLLNGHLYYLVPLPPPKANSKKKVRFAEPEVVEGAKESGVVRIKLVISKQELQHMVLQKGGISVNEMLSLAHGDRGLIMDGEEDVCRKNDDGSQVWKPVLESIPEVN. 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05172 160 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 158 - -
Seca8g05172 160 Pfam PADRE domain 1 158 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05172 Seca-Chr8 141726475 141726957 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05172 - - gmx:100780937 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05172 8 141726475 141726957 Seca8g05172 8 141726475 141726957 ECH