Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05163 ATGGAGGTGAAAAATGAAGATTTAGAGCTGCAAACGTGGTCTGATCTCCCTGCCGAACTCTTAGAATTAATCCTTTCGCGTTTAACCCTAGATGATAATGTCCGTGCTTCAGTTGTTTGCAAGAGATGGCATTCTGTTGCCACTGCTGTACGTGTGGTAAACCAATCACCATGGATAATGTATTTTCCAAAATTTGGTGACTGGTATGACTTCTTTGACCCTGTCCAGCGTAAGACTTATTCCCTTGAGTTGCCAGAGTTGAGTGGATCTAGAGTTTGTTATACAAAAGATGGTTGGTTGCTGCTATACCGGCCCAGAACTCACCGAGTCTTCTTCTTCAATCCCTTTACTCGGGAGATTATCAAACTGCCAAGATTTGAGATGACATACCAGATAGTTGCATTCTCTTGTGCTCCAACATCACCTGACTGTGTCCTGTTAACTGTTAAGCATGTTAGTCCTACTGTTGTGGCCATTAGCACATGTTACCCTGGGGCAACAGAATGGACCACTGTTAATTACCAAAACCGCTTGCCCTTTGTTAGTAGCATATGGAATAAGCTTGTGTTTTGTAATGGACTCTTCTATTGTTTGAGTCTCACAGGTTGGCTAGGGGTGTTTAACCCATCTGAACGCACTTGGAGCGTTCTGTCTGTACCTCCACCCCAATGCCCAGAGAATTTTTTTGCTAAAAATTGGTGGAAGGGGAAATTTATGACTGAGCAAGATGGAGATGTTATAGTGATTTATACATGTTCTAGTGAAAACCCCATTATTTTTAAGTTAGATCAGACATTAATGGAATGGGAAGAGATGACAACACTAGATGGAATAACTCTTTTTGCTAGTTTCTTGACTTCTCATTCAAGGACTGACCTCCCTGGAATAATGAGGAACAGTGTCTACTTCTCTAAAGTTCGTTTCTATGGAAAGCGTTGCATATCATTCTCCCTTGATGACTATAGGTACTATCCTCGTAAGCAGTGGCATGACTGGGGAGAACAAGACCCTTTTGAAAACATATGGGTTGAACCACCAAAAGACTTCTCAGGGTTCACGTGA 1062 0.42 MEVKNEDLELQTWSDLPAELLELILSRLTLDDNVRASVVCKRWHSVATAVRVVNQSPWIMYFPKFGDWYDFFDPVQRKTYSLELPELSGSRVCYTKDGWLLLYRPRTHRVFFFNPFTREIIKLPRFEMTYQIVAFSCAPTSPDCVLLTVKHVSPTVVAISTCYPGATEWTTVNYQNRLPFVSSIWNKLVFCNGLFYCLSLTGWLGVFNPSERTWSVLSVPPPQCPENFFAKNWWKGKFMTEQDGDVIVIYTCSSENPIIFKLDQTLMEWEEMTTLDGITLFASFLTSHSRTDLPGIMRNSVYFSKVRFYGKRCISFSLDDYRYYPRKQWHDWGEQDPFENIWVEPPKDFSGFT. 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05163 353 ProSiteProfiles F-box domain profile. 10 61 IPR001810 GO:0005515
Seca8g05163 353 PANTHER OS09G0392200 PROTEIN 8 347 IPR044619 -
Seca8g05163 353 Pfam F-box-like 13 48 IPR001810 GO:0005515
Seca8g05163 353 CDD F-box_SF 14 48 - -
Seca8g05163 353 SUPERFAMILY F-box domain 10 104 IPR036047 GO:0005515
Seca8g05163 353 Gene3D - 12 51 - -
Seca8g05163 353 SMART fbox_2 16 56 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05163 Seca-Chr8 141622939 141626570 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05163 - - gmx:100809651 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05163 8 141622939 141626570 Seca8g05163 8 141622939 141626570 ECH