Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05119 ATGTATTTATACTTCAATGCAGTTCCAAGGAACTTCAGATTGCTGGAGGAACTTGAACGGGGAGAAAAAGGCATTGGAGATGGCACAGTTAGCTATGGAATGGATGATGGTGATGACATTTACATGCGCTCTTGGACCGGAACCATCATTGGCCCCCATAATACTGTACATGAAGGAAGAATTTATCAACTGAAGCTGTTTTGTGATAAAGACTACCCAGAAAAGCCCCCAAGTGTTCGGTTTCATTCACGGATCAATATGACTTGTGTTAATCATGAAACTGGAGTGGTATAA 294 0.415 MYLYFNAVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV. 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05119 97 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 42 92 - -
Seca8g05119 97 Pfam Ubiquitin-conjugating enzyme 39 96 IPR000608 -
Seca8g05119 97 Gene3D Ubiquitin Conjugating Enzyme 4 97 IPR016135 -
Seca8g05119 97 SUPERFAMILY UBC-like 7 97 IPR016135 -
Seca8g05119 97 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 9 97 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05119 Seca-Chr8 141133358 141137547 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05119 K10704 - csin:114292837 192.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05119 8 141133358 141137547 Seca8g05119 8 141133358 141137547 ECH
Seca8g05119 8 141133358 141137547 Seca8g05119 8 141133358 141137547 PCT