Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05108 ATGGCATGCTCTGCTACCTCTGCTTCTCTCTCTTCTTTAAACCCTAGAGCCCTCTTCTCTCCCAAACCCACCACTCTCTCTCTCCCCAACTCCCTCAACTTCAACGCTCTTCCCAAACCCTTATCTCGCCCTTCCCTTTCCTTCAATCGCCCCTCTCATCATTCTCGCCGCACCTTCCTCGTCAGGGCCTCTTCTTTATTGGAAAAACAGAATGAACTTCCATTAGTTGGGAATACAGCACCGGATTTTGAAGCAGAGGCCGTTTTTGATCAGGAGTTTATCAAGGTCAAACTCTCTGAGTACATTGGGAAGAAATATGTTATCCTCTTTTTCTACCCATTGGACTTCACATTTGTTTGTCCCACAGAAATCACTGCTTTCAGTGACCGGTATGCAGAGTTTGAGGCACTAAATACTGAGATATTGGGTGTTTCAGTTGACAGTGTGTTCTCTCACCTTGCATGGGTTCAAACGGATAGAAAGTCAGGCGGCCTTGGTGATTTGAATTATCCTTTGATTTCGGATGTCACCAAATCCATATCAAAATCTTATGGTGTTCTCATTCCTGATCAGGGAATTGCATTGAGAGGATTGTTCATTATTGATAAGGAGGGAGTTATTCAGCATTCTACCATCAACAACTTGGCAATTGGTAGAAGTGTTGATGAGACGAAAAGAACACTCCAGGCCTTGCAGTATGTGCAGGAGAACCCTGATGAAGTTTGCCCTGCTGGGTGGAAGCCTGGGGACAAGTCCATGAAACCAGACCCTAAACTTAGCAAAGACTACTTTGCAGCGGTGTAG 804 0.4527 MACSATSASLSSLNPRALFSPKPTTLSLPNSLNFNALPKPLSRPSLSFNRPSHHSRRTFLVRASSLLEKQNELPLVGNTAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAEFEALNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKDYFAAV. 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05108 267 Pfam AhpC/TSA family 76 209 IPR000866 GO:0016209|GO:0016491
Seca8g05108 267 SUPERFAMILY Thioredoxin-like 74 265 IPR036249 -
Seca8g05108 267 CDD PRX_Typ2cys 76 249 - -
Seca8g05108 267 ProSiteProfiles Thioredoxin domain profile. 74 233 IPR013766 -
Seca8g05108 267 FunFam 2-Cys peroxiredoxin BAS1, chloroplastic 68 267 - -
Seca8g05108 267 PANTHER THIOREDOXIN PEROXIDASE 71 266 - -
Seca8g05108 267 Pfam C-terminal domain of 1-Cys peroxiredoxin 230 264 IPR019479 GO:0051920
Seca8g05108 267 Gene3D Glutaredoxin 68 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05108 Seca-Chr8 141039212 141042953 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05108 K03386 - gmx:100786990 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05108 8 141039212 141042953 Seca8g05108 8 141039212 141042953 ECH