Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05107 ATGGAAGATACTAAATCGAGGTTCAAGAGGATTTGTGTGTACTGTGGAAGCAGTTCAGGGAACAAAGCTAGTTACCAAGAAGCTGCTGTAGAGCTAGGCAAGGAACTGGTGGAGAGAAGGATTGATTTGGTCTATGGAGGTGGTAGCGTGGGGCTGATGGGTCTCGTTTCTCAGGCAGTTCATGATGGTGGGCGACATGTTCTTGGTGTTATCCCAAAAAGTCTCATGCCAAGAGAGATAACTGGTGACCCTATTGGGGAAGTGAGAGCCGTATCTGATATGCATCAAAGAAAAGCTGAGATGGCTCGTCAAGCTGACGCTTTCATTGCCCTTCCTGGTGGATATGGAACTCTTGAAGAATTGCTGGAAATCATTACATGGGCTCAGCTTGGGATCCACAGCAAACCAGTGGGCCTGTTGAATGTGGATGGATTTTACAATTCCTTGTTGTCTTTCATTGACAAGGCCGTTGATGAAGGCTTTATCTCCCCAAAAGCACGTCGCATTATCGTGTCAGCTCCCACAGCCAAACAATTAGTGAGGGAGCTTGAGGAACATGTACCTGAGCAAGATGAAGTTGTATCCAAGTTGGTTTGGGAAGACAGACTCAGTTACGTGCCTGAATCAGAAGTTGCCATGTGA 642 0.4673 MEDTKSRFKRICVYCGSSSGNKASYQEAAVELGKELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPKSLMPREITGDPIGEVRAVSDMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHSKPVGLLNVDGFYNSLLSFIDKAVDEGFISPKARRIIVSAPTAKQLVRELEEHVPEQDEVVSKLVWEDRLSYVPESEVAM. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05107 213 FunFam CASP-like protein 1 185 - -
Seca8g05107 213 Pfam Possible lysine decarboxylase 53 182 IPR031100 -
Seca8g05107 213 PANTHER LOG FAMILY PROTEIN YJL055W 4 207 - -
Seca8g05107 213 Gene3D - 1 185 - -
Seca8g05107 213 NCBIfam Rossman fold protein, TIGR00730 family 9 185 IPR005269 GO:0009691|GO:0016787
Seca8g05107 213 SUPERFAMILY MCP/YpsA-like 7 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05107 Seca-Chr8 141030506 141034100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05107 K22522 - gmx:100816928 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05107 8 141030506 141034100 Seca8g05107 8 141030506 141034100 ECH