Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05071 ATGGCAACGCACCCTCAACCTCCCACCTTCTCCGATGCCTTTTCCTTTCTCTCCCATGGCTGGCGCGAGGATCTCCGCCTCATGCGGGACCGCGCCAACTCCTTCAGGAACCTCGCCACCACGTCGTCGTTTGAGGACTCGCCGCCGCTATTCTCCGCGCGCCCTCCGCCGCTGCCCACCGAGGTGGACTTCGTCAAGAACTTGCGCCCCAAGTTGTCGGAGATCCCCAGGTGGCAGCCATCGAGGTCAAGGATTCGTATCGACCTGTCCGCCATAAGGGAGGCATTCGAGTCGGAGGTGGAGGACATGGATGGAATTTTGGGTTTTGGTGGGGACAGGAAGTGGAAGAGGTTGAGTTGTAAGGAGTTTTGGGGTGAGTGGAATGGGGATGAGCACCGCCATAAGGATTGGGAGCCAATTCGTGCCTTGAAGACGAGGTTCAAAGAGTTTGAGAAGAATAGCGAGTTCGTGGGGAAATTGAAGTCTAGCTTCAAATCAATGTGCAAGGAGCCTCAAGAGTCAAAGGAAGTTCCCCCATTGGATGTGCCTGAACTTCTGGCCTACTTTGTTAGACAATCTGTACCATTTTTGGATCAACTTGGAGTCAAAAGAGACATATGTGACAAGATAGTGAAAAGCTTGTATAGAAAACGTAAGAACCAACTTCTACTGCACTCCTTTTCTGGCGAAGAATCTCCTGTTCTTGATAATGGAAACATAAATGATGAATTGGATTTGCGAATAGCAAGTGTCCTTCAGAGTACGGGGCACCAGTATGATGGTGGATTCTGGACAGACCATGCAAAACACGATCTGTCAGACAATAAAAGGCAAGTTGCAATAGTCACAACTGCTAGTCTTCCCTGGATGACTGGAACTGCTGTAAATCCATTATTTCGAGCTGCATATCTATCACGATCTTCAAAGCAGAAAGTCACTCTGCTGGTTCCATGGCTTTGTACGTCGGATCAAGAGCTTGTTTATCCTGGCAAGCTCACTTTTGCTTCACCAGAAGAGCAGGAGGTTTATATACGTAATTGGCTTGAGGAAAGGATTGGTTTTAAGGCTGACTTTAAAATTTCCTTCTATCCTGGGAAGTTTTCAAAAGAGAGGCGGAGTATAATAGCCGCTGGTGATACTTCTCAATTTATACCATCCAGGGATGCTGACATTGCTATTTTGGAAGAACCTGAACATTTGAATTGGTATCATCATGGTAAGCGCTGGACAAAGAAATTCAACCATGTTGTTGGTATTGTCCACACAAATTACTTAGAGTATATCAAGAGGGAAAAAAATGGGGCCCTCCAGGCATTCTTTGTGAAACACATAAACAACTGGGTTACAAGAGCATACTGCCACAAGGTTCTTCGCCTCTCAGCTGCCACACAGGATTTACCCAAGTCTGTAATTTGTAATGTTCACGGTGTGAATCCTAAATTCTTAAAAATTGGAGAGAAGATCGCTGCAGATAGAGAGCTTGGGCAGAAAGCCTTCACAAAAGGGGCATATTTCTTGGGGAAGATGGTATGGGCTAAGGGATATAAGGAATTGATATATTTATTAGCAAAGCATAAGAGTGACCTTGATGGCTTCAAGTTGGATGTATTCGGTAATGGAGAGGATGCTAACGAAGTTCAGAGTATGGCTAAAAGGTTGGATTTGAATATCAACTTTCAGAAAGGAAGGGACCATGCAGAGGATTCTCTCCATGGGTACAAAGTCTTCATAAATCCTAGTGTTAGTGATGTGCTCTGCACAGCTACAGCTGAGGCACTTGCCATGGGAAAGTTTGTAGTTTGTGCTGATCATCCATCAAATGAGTTCTTCAGGTCATTTCCAAACTGCTTGACATACAAGACATCTGAAGACTTTGTGGCAAAGGTAAAAGAATCATTAGAAAATGAGCCTCATCTTCTTACACCTGAGGAAAGATATCAACTTTCTTGGGAGGCTGCTACTCAAAGATTTATGGAATATTCTGAGCTTGACAGAGTGGTGAACAAGGAAAAGAATTCTGCAAAGTCAAGTACAGATACTGGAAAGCTCATTGCTAATTCACTATTAATGCCTAATCTGACAGAACTATTAGATGGGGGATTAGCATTTGCTCACTACTGTCTCACTGGGAATGAATTCCTGAGACTGTGTACTGGAGCGATTCCTGGGACACGTGACTATGACAAGCAGCACTGTGAAGACCTTCAACTCTTGCCCCCACAGGTAGAAAATCCTATCTATGGCTTGTGA 2250 0.4493 MATHPQPPTFSDAFSFLSHGWREDLRLMRDRANSFRNLATTSSFEDSPPLFSARPPPLPTEVDFVKNLRPKLSEIPRWQPSRSRIRIDLSAIREAFESEVEDMDGILGFGGDRKWKRLSCKEFWGEWNGDEHRHKDWEPIRALKTRFKEFEKNSEFVGKLKSSFKSMCKEPQESKEVPPLDVPELLAYFVRQSVPFLDQLGVKRDICDKIVKSLYRKRKNQLLLHSFSGEESPVLDNGNINDELDLRIASVLQSTGHQYDGGFWTDHAKHDLSDNKRQVAIVTTASLPWMTGTAVNPLFRAAYLSRSSKQKVTLLVPWLCTSDQELVYPGKLTFASPEEQEVYIRNWLEERIGFKADFKISFYPGKFSKERRSIIAAGDTSQFIPSRDADIAILEEPEHLNWYHHGKRWTKKFNHVVGIVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCHKVLRLSAATQDLPKSVICNVHGVNPKFLKIGEKIAADRELGQKAFTKGAYFLGKMVWAKGYKELIYLLAKHKSDLDGFKLDVFGNGEDANEVQSMAKRLDLNINFQKGRDHAEDSLHGYKVFINPSVSDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTSEDFVAKVKESLENEPHLLTPEERYQLSWEAATQRFMEYSELDRVVNKEKNSAKSSTDTGKLIANSLLMPNLTELLDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYDKQHCEDLQLLPPQVENPIYGL. 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05071 749 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 279 659 - -
Seca8g05071 749 CDD Glycosyltransferase_GTB-type 408 610 - -
Seca8g05071 749 Gene3D Glycogen Phosphorylase B; 477 636 - -
Seca8g05071 749 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic-like 366 476 - -
Seca8g05071 749 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic 477 635 - -
Seca8g05071 749 Pfam Glycosyl transferases group 1 504 638 IPR001296 GO:0016757
Seca8g05071 749 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 137 747 IPR044525 GO:0046481
Seca8g05071 749 Gene3D Glycogen Phosphorylase B; 368 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05071 Seca-Chr8 140414470 140420635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05071 12 571 Glycosyltransferase AT3G11670 64.638 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05071 K09480 - gmx:100796354 1235.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05071 8 140414470 140420635 Seca8g05071 8 140414470 140420635 ECH