Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05044 ATGGAATCTGAAAATGGAGTTGCTATGGAGGATGAGAAACATGTTATTGGGGAAACAACTAAGGAGAACATAGACAAAAAAGTTGAAAATGATTTTAATGCAGAAATTCAGACCAAGAATGAAGTATCTGAGCCAACAGCAGAAGTTGAAGGCCAAAATTCTGCAGTAAATAAAAACTCAAAACGTGCCAAGGAACCTAGTGGCAAAGTTGGTGTTGTTTCAAAGAACAATAAATCTGCCACCAAAGATAAACCCAATTTGAAGACCCCAATAGCATCATCTAAAACACAGAGGCCAAACCTTTCCAAGAGTCTTACTTTCCCAGCCAAATCAGTTCGTGGAGATGGTATGAAGAAAAGCACTGATGGGATTCTCGTGAAGACTGAAAATAAGCATGTTCAAGGTAATGGGGTTAGAGCTGAGGCTTCCATTCGTCATTCAAATTCAAGCAGGTTGACAAACTCAAAGGAGGCAAAGACAAACACTGGAAATTCTAACCAAAGGAATTCTTTGACATCCATGAGTAGCTTTAAACGCTCTGCGTTTGGAAGGTCTACCCCGGTGAATGCAGTTGCCAAAAGTCTTACATCTGAGGCATCTCTACCTGTTGATCAGATTTCAAACCCAGCAAAAACTGAGAAACCAAATAAAGAGGATGATGATGCTCATTCCACTACTTCAAGTGTTACTCCCCGTAGGAGGAGCAGTGGTTCTGGATTTTCCTTTAGATTGGAAGAAAGAGCTGAAAAGAGGAAGGAGTTCTTCTCAAAGTTAGAAGAGAAAATTCAGGAAAAGGAAGCAGAGAAAAGTAACCAGCAAGAGAAATCAAAGGAAAATCAGGAGGCAGAGATAAAGCAATTGAGGAAGAGGATGATATTCAAAGCCACTCCAATGCCAAATTTTTACAAGGAACCTCCTCCAAAAGTTGAACTGAAGAAGATACCAACAACACGCCCAATATCCCCAAAGCTTGGGAGGCACAAGGGATCTGCTGTGAACAATTCAGAAGATAAATCTTGTTCTAGCCCACGTGGGAAGCAACAGCAGAATGATTCAACCAAGGCAAAGGTAAAGGGTTATAAAGATGTGATTTCAAAGAAACCAATCAGAAAAACTCAAGCCAAGCAACAGTCTCAGGAAACTGCAACCAGTAAAACTGAAAGGGATTCTGTCACAAGCCAAGATGCAAAAGCAGGTATAGGAAGTAATGAAGAAACCCAAGATCCACCGGTTAACAATTCTGAATACCAAAATGGCATGGAGCCAGAATCCCAAAATGATCATTCTCAAAATGGTGCACTGGTCTTAAATACATCCACACCTGAGATTGTATCATATGAGGTTGCTGTTGGAGTGTAG 1359 0.4062 MESENGVAMEDEKHVIGETTKENIDKKVENDFNAEIQTKNEVSEPTAEVEGQNSAVNKNSKRAKEPSGKVGVVSKNNKSATKDKPNLKTPIASSKTQRPNLSKSLTFPAKSVRGDGMKKSTDGILVKTENKHVQGNGVRAEASIRHSNSSRLTNSKEAKTNTGNSNQRNSLTSMSSFKRSAFGRSTPVNAVAKSLTSEASLPVDQISNPAKTEKPNKEDDDAHSTTSSVTPRRRSSGSGFSFRLEERAEKRKEFFSKLEEKIQEKEAEKSNQQEKSKENQEAEIKQLRKRMIFKATPMPNFYKEPPPKVELKKIPTTRPISPKLGRHKGSAVNNSEDKSCSSPRGKQQQNDSTKAKVKGYKDVISKKPIRKTQAKQQSQETATSKTERDSVTSQDAKAGIGSNEETQDPPVNNSEYQNGMEPESQNDHSQNGALVLNTSTPEIVSYEVAVGV. 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05044 452 MobiDBLite consensus disorder prediction 262 438 - -
Seca8g05044 452 MobiDBLite consensus disorder prediction 355 369 - -
Seca8g05044 452 MobiDBLite consensus disorder prediction 1 246 - -
Seca8g05044 452 MobiDBLite consensus disorder prediction 1 34 - -
Seca8g05044 452 MobiDBLite consensus disorder prediction 334 354 - -
Seca8g05044 452 MobiDBLite consensus disorder prediction 72 107 - -
Seca8g05044 452 MobiDBLite consensus disorder prediction 35 61 - -
Seca8g05044 452 Coils Coil 248 290 - -
Seca8g05044 452 Pfam Targeting protein for Xklp2 (TPX2) domain 240 309 IPR027329 -
Seca8g05044 452 MobiDBLite consensus disorder prediction 370 438 - -
Seca8g05044 452 PANTHER PROTEIN WVD2-LIKE 4 58 444 IPR044833 GO:0008017
Seca8g05044 452 MobiDBLite consensus disorder prediction 211 227 - -
Seca8g05044 452 MobiDBLite consensus disorder prediction 262 290 - -
Seca8g05044 452 MobiDBLite consensus disorder prediction 141 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05044 Seca-Chr8 139841026 139845728 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05044 - - gmx:100798810 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05044 8 139841026 139845728 Seca2g04165 2 125591231 125591818 PCT