Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04985 ATGGCCAATTCCTTTGCAAAATTCCTTCCTTCTTCCCTCATCTACCTCTCCTTCATCTCCATCTTCGCCACCGCAAAATCCCACTCTTTCGTCCGTACCATTTCCCCCACAACATTGGGACTCAACAAGCCACAAAAACTCAGCCACCTACACTTCTACTTCCACGACATCATCGACGGGCCTAACCAAACCGCCGTGCGTGTCGCGGCGGCTTCGTCCACCGAAAAGTCGCCGACGGGGTTCGGCGCGGTGGTCATGATGGACGACCCACTGACGGAGCTGCCGGAAGCAAGTTCCAAGGTGGTGGGAAGAGCGCAGGGAATCTACGCTTCGGCTTCGCAGAGCGAGTTGGGATTCCTCATGGTGCTCAATTTCGCGTTCACCCAAGGGAAGTACAACGGCAGCAATCTCAGCGTGTTGGGGCGGAACATGGTGGAATCTGCCGTGAGGGAAATGCCGGTGGTGGGCGGCAGTGGGTTGTTCCGGTTCGCGCGTGGGTATGCTCAGGCCAGGACTTATTCTTTAAATGGATCGGAAGCTGTTGTGGAATATAATGTGTATGTATTCCATTATTAA 576 0.5417 MANSFAKFLPSSLIYLSFISIFATAKSHSFVRTISPTTLGLNKPQKLSHLHFYFHDIIDGPNQTAVRVAAASSTEKSPTGFGAVVMMDDPLTELPEASSKVVGRAQGIYASASQSELGFLMVLNFAFTQGKYNGSNLSVLGRNMVESAVREMPVVGGSGLFRFARGYAQARTYSLNGSEAVVEYNVYVFHY. 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04985 191 PANTHER NUCLEOPORIN-RELATED 32 187 IPR004265 -
Seca8g04985 191 Pfam Dirigent-like protein 48 189 IPR004265 -
Seca8g04985 191 Gene3D - 34 189 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04985 Seca-Chr8 139095653 139096228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04985 - - gmx:100798988 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04985 8 139095653 139096228 Seca8g04985 8 139095653 139096228 ECH