Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04926 ATGACGTACACAATCGAACCTTCCACGTCGTGTTGGATTCACCCAAGGCGCGAGCCCTTCGAGCACGGCCTCTTGCCCATCCCCAAGCTCATCTTCCCTGACCCCACGCAAACCCTAATCACATTGAAGCGCAAGCTTCTCAGCTCCTCCTCCAATCACCGAGTCGACTCGGCAGCCATCTCCGAGTCCCTCCAGATCACCCCCGACCACGCCACGCTCCTCCTTGACACCCTCGCCTCCGTCCACCACTCCGACTCCGAACCTCTGGTTCGAGCTACCCCCGGCCAAAACGACACCGTTGGCGCCGACGTCCACGATCTGCTCCTGTTTCTCTACATCCAATCCTACAAGAGGTTGCTCCCCCGGTCCCACAAGGACTCCGCCGCCGTCGCCGACGTTTGGCCTTCTACTTCAGCCTTCGACGGCTACTTGTCCGCTCTCTCCCCTCTTCAGCTTGTGCGCAGCAACAGTCGGCGTTTTATGCCTTCGCAGGCTGATGAAGAGGCACATCAGTTATCTTATCTGCAAAAGCATGTGGCTAACATTCTATCTCTTCTAGCAGAGCCGATGGAAGGGGAAGGGGAAGGGGAAGGGGTTTTAACTATGGATAGATTCGAGCATCTTGGGTTTCTAATTCAGTTTGGTGATAAGGCTGAAGGAACTTCTTTGAGTCAATCATCTCCTTTTTTTGCAAACTCAGATCCTGACATGCCTGCTGCTCCCGTTCCCGCAGCGCAAGTTCACGATTGGCTTTTGCAGAATATCACTTCTGCTTTGGAACGCATTTCTGAAAGGACTTCTGCAAAGGAAAATGGGCCGGCCAGTGTCAGTGATCAGGATGTTGCTATGCCTGATGCATGTACCGTCTCTGTTAAGGTCTCATCGAGTAGTAGAGGTCCAAGTTTCATTGAAGGGATCTCTAAATCATCTTATGTGAAGCATGTATCTGACATTAAAGGTTCCTCTGTTAAGGTTCTAAATTGCCATGAGTCTACCATCTATGTCTTAGCACCTTTGAGATATGCCACTGTATACGGATGCTCAGATGCTACAATAGTTCTAGGAGCAGTTGGCAAGGCTGTGAGAGTAGAGCATTGTGAACGGGTTCATGTGATTGTGGCTGCAAAACATATTTCCATTGCCAACTGCCGTGAATGTGTTTTCTTTTTGGGAGTAAATCAGCAACCTCTTATTGTTGGTGATAACCATAAACTGCAGGTGGCACCATATAATACATTTTACCCCCAGTTGGAGGAGCACATGAGTGAAGTTGGTATTCTGCCCACAGTAAACAGATGGGATGAACCTCTGGTGTTGGGCGTGCTTGATCCTCATGATTCATTATCTCATCCAGCAGGTGTCTCTGATGTTCAAGCTGAGTCTGCTACACGGGTGGACCCTGATCAGTTCACAAATTTTGTGATTCCAAACTGGCTTGCAGGAGAGTCCACTGGATCTACAAGGGACAACCCATTTACATTACCAGATGCATATGCGGCATCTAAGCACAGAAATCAAAAAAATTTAGGGGAGATAAGGCAACTATTACAAGAAGCTTCTTTAGAAGAGAGTCGCAAACGAGAATTGTCATCTGCACTACATGTGTACTTCAAGGACTGGTTATATGCTTCAGGGAACATTCGTCAACTTTACTGTCTGCAAAGTGATTAA 1671 0.4853 MTYTIEPSTSCWIHPRREPFEHGLLPIPKLIFPDPTQTLITLKRKLLSSSSNHRVDSAAISESLQITPDHATLLLDTLASVHHSDSEPLVRATPGQNDTVGADVHDLLLFLYIQSYKRLLPRSHKDSAAVADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHVANILSLLAEPMEGEGEGEGVLTMDRFEHLGFLIQFGDKAEGTSLSQSSPFFANSDPDMPAAPVPAAQVHDWLLQNITSALERISERTSAKENGPASVSDQDVAMPDACTVSVKVSSSSRGPSFIEGISKSSYVKHVSDIKGSSVKVLNCHESTIYVLAPLRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKHISIANCRECVFFLGVNQQPLIVGDNHKLQVAPYNTFYPQLEEHMSEVGILPTVNRWDEPLVLGVLDPHDSLSHPAGVSDVQAESATRVDPDQFTNFVIPNWLAGESTGSTRDNPFTLPDAYAASKHRNQKNLGEIRQLLQEASLEESRKRELSSALHVYFKDWLYASGNIRQLYCLQSD. 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04926 556 Pfam Tubulin binding cofactor C 320 435 IPR012945 -
Seca8g04926 556 SMART carp 366 400 IPR006599 -
Seca8g04926 556 SMART carp 328 365 IPR006599 -
Seca8g04926 556 ProSiteProfiles C-CAP/cofactor C-like domain profile. 300 426 IPR017901 -
Seca8g04926 556 Gene3D - 301 464 IPR016098 -
Seca8g04926 556 PANTHER UNCHARACTERIZED 10 554 IPR039589 -
Seca8g04926 556 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 319 392 IPR036223 -
Seca8g04926 556 Coils Coil 512 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04926 Seca-Chr8 136458901 136471522 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04926 K16810 - gmx:100819271 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04926 8 136458901 136471522 Seca8g04926 8 136458901 136471522 ECH