Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04904 ATGGGTTGGAATCTCTTCTTTTGGCTTCTGATTTGTTTCCCCGCTAACATTGCCTTTCTCGCCTCTACTTTCTACCAGGTTTTGATCCTATCTGACTTGGAAGCGGACTATATCAACCCATTTGATGCTTCGTCTCGGATTAACTACTTCATTCTTCCTGAGTTCATTGGGCAGGGACTGTTATGTGTCCTCTGCCTCTTCACTGGTCACTGGTTCATGTTTTTGCTCACAGTTCCTGTTACTTGCTATCATGCCATGCTGTATGTGAAAAGAGAGCATCTTATTGATGTTACTGAAGTGTTTAGAGTACTTAATGCTGAGAAGAAATTTCGGATAGCCAAACTTGCTTTGTACTTAACAGTCCTCATTATCACCGTATTCAGGCTTACATTAATAGCTGTCTACTATTTAGGTATTGAAGATGATGATGACTTGGGAAACCTTTGGTAA 450 0.4067 MGWNLFFWLLICFPANIAFLASTFYQVLILSDLEADYINPFDASSRINYFILPEFIGQGLLCVLCLFTGHWFMFLLTVPVTCYHAMLYVKREHLIDVTEVFRVLNAEKKFRIAKLALYLTVLIITVFRLTLIAVYYLGIEDDDDLGNLW. 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04904 149 SMART Cornichon_2 6 127 IPR003377 GO:0016192
Seca8g04904 149 PANTHER CORNICHON-RELATED 5 132 - -
Seca8g04904 149 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04904 Seca-Chr8 135940938 135953546 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04904 K20368 - gmx:100500341 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04904 8 135940938 135953546 Seca8g04904 8 135940938 135953546 ECH
Seca8g04904 8 135940938 135953546 Seca8g04904 8 135940938 135953546 PCT