Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04888 ATGCCTCTTCCAGCTGCAGCTGTGATCGTCCCATCGGGCCTCCTCTTCTTCGCCTCTGGCCTCATCGTTAACCTCATTCAGGCAATATGCTACGTCCTTGTGCGGCCTCTGTCAAAGAATTTGCACCGAAGGATCAATAGGGTGGTGGCAGAACTGCTGTGGCTGGAACTTGTGTGGCTTATTGATTGGTGGGCAGGAGTTAAGATCCAAGTATTCACAGATCGTGAAACCTTTCGTTTGATGGGTAAAGAACATGCGCTTGTCATATCCAATCACAGAAGTGATATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGCGTTCAGGTTGTCTTGGCAGCACCCTTGCTGTGATGAAGAAATCATCAAAGTTTCTGCCGGTCATTGGTTGGTCAATGTGGTTTTCTGAGTATCTTTTCTTGGAGAGAAGCTGGGCCAAGGATGAAAGCACATTAAAGTCAGGCCTACAGCAACTGAGGGATTTCCCTCTTCCCTTTTGGTTGGCTCTCTTTGTAGAAGGAACTCGCTTTACACAGGCCAAACTATTAGCTGCTCAGGAATATGCAACCTCAACTGGATTGCCTGTTCCTAGAAATGTTTTGATTCCAAGAACTAAGGGGTTTGTTTCAGCAGTAAGCCATATGCGCTCATTTGTTCCTGCCATTTATGATGTAACAGTGGCGATTCCTAAGAGTTCACCTGCTCCTACAATGCTAAGACTCTTCAGGGGGCAACCTTCAGTGGTGCATGTGCATATTAAGCGGCATGTGATGAAGGATTTGCCAGAAGCAGATGAAGCTGTTGCTCAATGGTGTCGAGATATGTTTGTGGCTAAGGATGCATTGATAGACAAACATATAGCTGAGGACAAATTCAGTGATCAAGAGCTGCAGGATACGGGTCGACCAATAAAGTCTCTTCTGGTTGTGACTACATGGGTTTGTGTGGTGGTCACTGGAGCTGTAAAGTTCCTCCTATGGTCTTCACTACTATCCTCCTGGAAGGGTGTTGCATTTTCAGCATTCAGTTTGGCAGTTGTTACTCTCCTCATGCATGTCATGATTAAGTTTTCGCAATCTGAGCGTTCAACCCCTGCCAAGGTTGCCCCTGCAAAGCCTAAGAATAGAGAACAGGTGCAGGGTAGGGATGAGAAACAAGACTAG 1161 0.4634 MPLPAAAVIVPSGLLFFASGLIVNLIQAICYVLVRPLSKNLHRRINRVVAELLWLELVWLIDWWAGVKIQVFTDRETFRLMGKEHALVISNHRSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLKSGLQQLRDFPLPFWLALFVEGTRFTQAKLLAAQEYATSTGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMLRLFRGQPSVVHVHIKRHVMKDLPEADEAVAQWCRDMFVAKDALIDKHIAEDKFSDQELQDTGRPIKSLLVVTTWVCVVVTGAVKFLLWSSLLSSWKGVAFSAFSLAVVTLLMHVMIKFSQSERSTPAKVAPAKPKNREQVQGRDEKQD. 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04888 386 CDD LPLAT_LCLAT1-like 62 253 - -
Seca8g04888 386 SMART plsc_2 86 208 IPR002123 GO:0016746
Seca8g04888 386 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
Seca8g04888 386 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 63 289 - -
Seca8g04888 386 Pfam Acyltransferase 80 228 IPR002123 GO:0016746
Seca8g04888 386 MobiDBLite consensus disorder prediction 359 386 - -
Seca8g04888 386 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 10 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04888 Seca-Chr8 135354742 135364100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04888 5 385 Miscellaneous Gene Families AT3G57650 76.378 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04888 K13523 - gmx:100814107 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04888 8 135354742 135364100 Seca8g04888 8 135354742 135364100 ECH